RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CCDC80Q76M96 950 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 TTC9BQ8N6N2 239 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 PPP1R14CQ8TAE6 165 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 URGCPQ8TCY9 931 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 E2F7Q96AV8 911 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 CERS2Q96G23 380 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 AGAP2Q99490 1192 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 ABCC13Q9NSE7 274 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 NDFIP2Q9NV92 336 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 TBC1D13Q9NVG8 400 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 SRRDQ9UH36 339 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 TSC2P49815 1807 aa11.73□□□□□ -0.53
USP35-207ENST00000530546 C15orf38-AP3S2A0A0A6YYH1 394 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 ALDH1A2O94788 518 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 ALDOAP04075 364 aaKnown RBP11.72□□□□□ -0.53
USP35-207ENST00000530546 ATP5BP06576 529 aaKnown RBP11.72□□□□□ -0.53
USP35-207ENST00000530546 TYMPP19971 482 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 CES4AQ5XG92 561 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 ITPRIPL1Q6GPH6 555 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 ARPINQ7Z6K5 226 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 C14orf80Q86SX3 495 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 ATPAF2Q8N5M1 289 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 CNTD1Q8N815 330 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 ATAD1Q8NBU5 361 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 RBM15BQ8NDT2 890 aaKnown RBP11.72□□□□□ -0.53
USP35-207ENST00000530546 PRR11Q96HE9 360 aaPredicted RBP11.72□□□□□ -0.53
USP35-207ENST00000530546 SIKE1Q9BRV8 207 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 MRPS26Q9BYN8 205 aaKnown RBP11.72□□□□□ -0.53
USP35-207ENST00000530546 LRRC40Q9H9A6 602 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 STARD7Q9NQZ5 370 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 CHRAC1Q9NRG0 131 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 OSER1Q9NX31 292 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 HCSTQ9UBK5 93 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 SPECC1L-ADORA2AF8WAN1 911 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 TNFRSF10BO14763 440 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 USP1O94782 785 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 MT-CYBP00156 380 aaPredicted RBP11.72□□□□□ -0.53
USP35-207ENST00000530546 CCR1P32246 355 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 RAB15P59190 212 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 RPL10AP62906 217 aaKnown RBP11.72□□□□□ -0.53
USP35-207ENST00000530546 MSLNQ13421 630 aaPredicted RBP11.72□□□□□ -0.53
USP35-207ENST00000530546 SFT2D3Q587I9 215 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 CMC1Q7Z7K0 106 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 TEKT5Q96M29 485 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 CORO1BQ9BR76 489 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 NAT9Q9BTE0 207 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 BRD8Q9H0E9 1235 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 TAGLN3Q9UI15 199 aa11.72□□□□□ -0.53
USP35-207ENST00000530546 TDRD15B5MCY1 1934 aaKnown RBP11.71□□□□□ -0.53
USP35-207ENST00000530546 ARHGEF37A1IGU5 675 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 E9PBE3 544 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 CABYRO75952 493 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 PGM3O95394 542 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 TFAP2AP05549 437 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 PDE1CQ14123 709 aaPredicted RBP11.71□□□□□ -0.53
USP35-207ENST00000530546 N4BP2L1Q5TBK1 243 aaPredicted RBP11.71□□□□□ -0.53
USP35-207ENST00000530546 TRAF7Q6Q0C0 670 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 STRA8Q7Z7C7 330 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 ARID3BQ8IVW6 561 aaPredicted RBP11.71□□□□□ -0.53
USP35-207ENST00000530546 COLGALT2Q8IYK4 626 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 BBS5Q8N3I7 341 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 MARVELD2Q8N4S9 558 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.71□□□□□ -0.53
USP35-207ENST00000530546 IPMKQ8NFU5 416 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 SNRNP27Q8WVK2 155 aaKnown RBP11.71□□□□□ -0.53
USP35-207ENST00000530546 JADE3Q92613 823 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 SLC39A8Q9C0K1 460 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 OSBPL2Q9H1P3 480 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 DDX18Q9NVP1 670 aaKnown RBP11.71□□□□□ -0.53
USP35-207ENST00000530546 TRHDEQ9UKU6 1024 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 SLC27A5Q9Y2P5 690 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 RAD54BQ9Y620 910 aa11.71□□□□□ -0.53
USP35-207ENST00000530546 SHROOM3Q8TF72 1996 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 MTSS1O43312 755 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 IGLV3-25P01717 112 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 HMBSP08397 361 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 MYL2P10916 166 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 TYK2P29597 1187 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 CRHR1P34998 444 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 PBX3P40426 434 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 AQP4P55087 323 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 GSTM4Q03013 218 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 DLG1Q12959 904 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 NOGQ13253 232 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 PRPSAP1Q14558 356 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 SPANXN3Q5MJ09 141 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.54
USP35-207ENST00000530546 FAM171A1Q5VUB5 890 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 ABI1Q8IZP0 508 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 THTPAQ9BU02 230 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 NMUR2Q9GZQ4 415 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 CASS4Q9NQ75 786 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 C20orf96Q9NUD7 363 aaPredicted RBP11.71□□□□□ -0.54
USP35-207ENST00000530546 ZNF358Q9NW07 568 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 ARHGEF38Q9NXL2 777 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 KCNK4Q9NYG8 393 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 TMED5Q9Y3A6 229 aa11.71□□□□□ -0.54
USP35-207ENST00000530546 A0A1W2PQ45 241 aaPredicted RBP11.7□□□□□ -0.54
USP35-207ENST00000530546 A0A1W2PQY0 241 aa11.7□□□□□ -0.54
USP35-207ENST00000530546 NT5C1B-RDH14C9J2C7 533 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms