RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 GCH1P30793 250 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 GNAQP50148 359 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 PSMC6P62333 389 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 CSTF3Q12996 717 aaKnown RBP7.77□□□□□ -1.17
NUP54-215ENST00000514313 VEPH1Q14D04 833 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 SLC30A6Q6NXT4 461 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 TMEM154Q6P9G4 183 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 TRIM74Q86UV6 250 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 TRIM73Q86UV7 250 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 AMER2Q8N7J2 671 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 HDAC7Q8WUI4 952 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 TMEM170AQ8WVE7 144 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 POMGNT1Q8WZA1 660 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 YME1L1Q96TA2 773 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 H2AFJQ9BTM1 129 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 MAK16Q9BXY0 300 aaKnown RBP7.77□□□□□ -1.17
NUP54-215ENST00000514313 TXLNGYQ9BZA5 131 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 SH2D4AQ9H788 454 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 MOV10Q9HCE1 1003 aaKnown RBP7.77□□□□□ -1.17
NUP54-215ENST00000514313 CHORDC1Q9UHD1 332 aaPredicted RBP7.77□□□□□ -1.17
NUP54-215ENST00000514313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.77□□□□□ -1.17
NUP54-215ENST00000514313 WNT6Q9Y6F9 365 aa7.77□□□□□ -1.17
NUP54-215ENST00000514313 TTC36A6NLP5 189 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 A8MZ25 164 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 BTBD18B2RXH4 712 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 RNF8O76064 485 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 TNFRSF1AP19438 455 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 TFEBP19484 476 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 MCM3P25205 808 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 MCM7P33993 719 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 CDH8P55286 799 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 SLC18A2Q05940 514 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 SYTL3Q4VX76 610 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 PLEKHS1Q5SXH7 462 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 GKAP1Q5VSY0 366 aaPredicted RBP7.76□□□□□ -1.17
NUP54-215ENST00000514313 ARMC3Q5W041 872 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 TSSK4Q6SA08 328 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 LRIG3Q6UXM1 1119 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 CYB5R4Q7L1T6 521 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 KRT77Q7Z794 578 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 FAM9BQ8IZU0 186 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 ZNF398Q8TD17 642 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 PABPC5Q96DU9 382 aaKnown RBP7.76□□□□□ -1.17
NUP54-215ENST00000514313 MMABQ96EY8 250 aaPredicted RBP7.76□□□□□ -1.17
NUP54-215ENST00000514313 C1orf74Q96LT6 269 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 DUSP26Q9BV47 211 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 ACTR5Q9H9F9 607 aaPredicted RBP7.76□□□□□ -1.17
NUP54-215ENST00000514313 SLC6A13Q9NSD5 602 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 BCCIPQ9P287 314 aaKnown RBP eCLIP7.76□□□□□ -1.17
NUP54-215ENST00000514313 IPO11Q9UI26 975 aaKnown RBP7.76□□□□□ -1.17
NUP54-215ENST00000514313 MST1RQ04912 1400 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 PASKQ96RG2 1323 aa7.76□□□□□ -1.17
NUP54-215ENST00000514313 TAF4O00268 1085 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 SLC25A17O43808 307 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 WNT1P04628 370 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 CLTBP09497 229 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 NR2F1P10589 423 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 NNMTP40261 264 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 EIF2DP41214 584 aaKnown RBP7.75□□□□□ -1.17
NUP54-215ENST00000514313 PIP4K2AP48426 406 aaPredicted RBP7.75□□□□□ -1.17
NUP54-215ENST00000514313 HDAC4P56524 1084 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 CLDN2P57739 230 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 NIPAL4Q0D2K0 466 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 PPP2R5BQ15173 497 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 PROSER3Q2NL68 480 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 PRAMEF17Q5VTA0 474 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 SARM1Q6SZW1 724 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 DHX40Q8IX18 779 aaKnown RBP7.75□□□□□ -1.17
NUP54-215ENST00000514313 KIAA2013Q8IYS2 634 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 GOLGA2P5Q9HBQ8 144 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 PDE7BQ9NP56 450 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 RRP7BPQ9NSQ0 103 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 SPATS2LQ9NUQ6 558 aaKnown RBP7.75□□□□□ -1.17
NUP54-215ENST00000514313 ABI3Q9P2A4 366 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 TLK1Q9UKI8 766 aa7.75□□□□□ -1.17
NUP54-215ENST00000514313 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.74□□□□□ -1.17
NUP54-215ENST00000514313 TMEM191CA6NGB0 347 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 FAM157AC9JC47 383 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 NPIPB11E5RHQ5 1161 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 IRF1P10914 325 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 DPP6P42658 865 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 F2RL1P55085 397 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 PRAMEP78395 509 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 LRMPQ12912 555 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 RAB41Q5JT25 222 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 TDRPQ86YL5 185 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 CADM3Q8N126 398 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 CCDC191Q8NCU4 936 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 OR4N2Q8NGD1 307 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 OSR1Q8TAX0 266 aaPredicted RBP7.74□□□□□ -1.17
NUP54-215ENST00000514313 ATOH1Q92858 354 aaPredicted RBP7.74□□□□□ -1.17
NUP54-215ENST00000514313 JAKMIP2Q96AA8 810 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 HAO1Q9UJM8 370 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 PACSIN3Q9UKS6 424 aa7.74□□□□□ -1.17
NUP54-215ENST00000514313 A0A1W2PRG0 241 aa7.73□□□□□ -1.17
NUP54-215ENST00000514313 USP17L23D6RBM5 183 aa7.73□□□□□ -1.17
NUP54-215ENST00000514313 TFP02787 698 aa7.73□□□□□ -1.17
NUP54-215ENST00000514313 YWHAQP27348 245 aa7.73□□□□□ -1.17
NUP54-215ENST00000514313 CDAP32320 146 aa7.73□□□□□ -1.17
NUP54-215ENST00000514313 GABRB2P47870 512 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms