RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 AIPL1Q9NZN9 384 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 CTNNAL1Q9UBT7 734 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 CCPG1Q9ULG6 757 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 CORO2BQ9UQ03 480 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 MAP3K19Q56UN5 1328 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 FLT4P35916 1363 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 BLMP54132 1417 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 NWD1Q149M9 1564 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 KAT6BQ8WYB5 2073 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 GPR75-ASB3A0A0A6YYF3 556 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 POM121BA6NF01 834 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 CLCA1A8K7I4 914 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 MASP2O00187 686 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 CASQ2O14958 399 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 SPTLC2O15270 562 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 PMM2O15305 246 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZNF254O75437 659 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 GFPT2O94808 682 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 KRT14P02533 472 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 CHRM5P08912 532 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 TOP1P11387 765 aaKnown RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 CERS1P27544 350 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 ITPKBP27987 946 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 TMPOP42166 694 aaKnown RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 CASP2P42575 452 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 CCT5P48643 541 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 SNX16P57768 344 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 TIRAPP58753 221 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 AP2B1P63010 937 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 OLR1P78380 273 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 TIAL1Q01085 375 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 BTKQ06187 659 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 KLC1Q07866 573 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 PPFIA1Q13136 1202 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 GRM1Q13255 1194 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 MSLNQ13421 630 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 NFE2L1Q14494 772 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 CLCA4Q14CN2 919 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 PROSER3Q2NL68 480 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 SPECC1Q5M775 1068 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 BEND6Q5SZJ8 279 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 PLAG1Q6DJT9 500 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 SERPINA13PQ6UXR4 307 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 CATSPERGQ6ZRH7 1159 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 PTCHD4Q6ZW05 846 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 AMIGO2Q86SJ2 522 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 GRAMD2AQ8IUY3 354 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 FAM98AQ8NCA5 519 aaKnown RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 APPL2Q8NEU8 664 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 SEMA6DQ8NFY4 1073 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 DQX1Q8TE96 717 aaKnown RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 ARHGEF2Q92974 986 aaKnown RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 SDCCAG3Q96C92 435 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 CATSPER2Q96P56 530 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 PRPF18Q99633 342 aaKnown RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 HERC2P3Q9BVR0 1158 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 NUF2Q9BZD4 464 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZBTB26Q9HCK0 441 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 SLC40A1Q9NP59 571 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 TBC1D23Q9NUY8 699 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 ANO10Q9NW15 660 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 FNIP2Q9P278 1114 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 DKK4Q9UBT3 224 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 TAGLN3Q9UI15 199 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 HERC5Q9UII4 1024 aaKnown RBP4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 ASB3Q9Y575 518 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 TRIM17Q9Y577 477 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 PCDHGB3Q9Y5G1 929 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 FADS3Q9Y5Q0 445 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 KNDC1Q76NI1 1749 aa4.85□□□□□ -1.63
HMGB3P13-201ENST00000511263 XRN1Q8IZH2 1706 aaKnown RBP4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 A0A0B4J203 849 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 A0A1W2PRQ8 180 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 FAM170AA1A519 330 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 A8MVJ9 347 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 BTBD19C9JJ37 291 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 POC1B-GALNT4F8VUJ3 575 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 NDC80O14777 642 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 SULT1B1O43704 296 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 PMPCBO75439 489 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 USP1O94782 785 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 FGAP02671 866 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 CYP1A2P05177 515 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 LINGO3P0C6S8 592 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 JUPP14923 745 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 CREB1P16220 341 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 PORP16435 677 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 MX1P20591 662 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 RBL1P28749 1068 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 TSPAN7P41732 249 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 ACADSBP45954 432 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 STT3AP46977 705 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 AARSP49588 968 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 ITGA8P53708 1063 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 AK2P54819 239 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 GEMIN4P57678 1058 aaKnown RBP4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 EVCP57679 992 aa4.84□□□□□ -1.63
HMGB3P13-201ENST00000511263 POLR2FP61218 127 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms