RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 KYAT3Q6YP21 454 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 GCNT7Q6ZNI0 430 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 SLFN11Q7Z7L1 901 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 PHLDB2Q86SQ0 1253 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 OR2AP1Q8NGE2 309 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 CASKIN2Q8WXE0 1202 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 ASB12Q8WXK4 309 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 LENG8Q96PV6 779 aaPredicted RBP20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 ERGIC2Q96RQ1 377 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 NRSN2Q9GZP1 204 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 RAB6CQ9H0N0 254 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 ZDHHC6Q9H6R6 413 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 FZD3Q9NPG1 666 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 DNAI1Q9UI46 699 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 LAMA5O15230 3695 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 FAM72CH0Y354 149 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 SIGLEC6O43699 453 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 KDELR3O43731 214 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 PIAS2O75928 621 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 DESP17661 470 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 AIF1P55008 147 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 HNRNPKP61978 463 aaKnown RBP eCLIP20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 TARDBPQ13148 414 aaKnown RBP eCLIP20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 SGCGQ13326 291 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 MAPK8IP2Q13387 824 aaPredicted RBP20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 STX1AQ16623 288 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 FAM72AQ5TYM5 149 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 FAM72DQ6L9T8 149 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 Q6ZSR6 202 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 PARS2Q7L3T8 475 aaKnown RBP20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 FAM72BQ86X60 149 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 RYBPQ8N488 228 aaPredicted RBP20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 CCDC185Q8N715 623 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 TM6SF2Q9BZW4 377 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 GPR27Q9NS67 375 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 NDFIP2Q9NV92 336 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 EVA1BQ9NVM1 165 aa20.3■□□□□ 0.84
UBE2D3-220ENST00000505307 ADAMTS20P59510 1910 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 TRPM6Q9BX84 2022 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 A0A087WV48 116 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 C16orf96A6NNT2 1141 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 TRIM38O00635 465 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 PAK4O96013 591 aaPredicted RBP20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 RABIFP47224 123 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 ZNF143P52747 638 aaPredicted RBP20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 CLDN2P57739 230 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 YBEYP58557 167 aaPredicted RBP20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 DAB2P98082 770 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 RAD51Q06609 339 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 COL28A1Q2UY09 1125 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 MYLK3Q32MK0 819 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 EFHC2Q5JST6 749 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 PPP1R2P3Q6NXS1 205 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 MON1BQ7L1V2 547 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 PTAR1Q7Z6K3 402 aaPredicted RBP20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 DENND6BQ8NEG7 585 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 BMFQ96LC9 184 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 AGPAT1Q99943 283 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 DUSP23Q9BVJ7 150 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 C1QTNF2Q9BXJ5 285 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 USP29Q9HBJ7 922 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 SEPT11Q9NVA2 429 aaKnown RBP20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 DONSONQ9NYP3 566 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 NLGN3Q9NZ94 848 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 NEU3Q9UQ49 428 aa20.29■□□□□ 0.84
UBE2D3-220ENST00000505307 NEMP1O14524 444 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 RIOK3O14730 519 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 FPGTO14772 594 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 GJB6O95452 261 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 RTP5Q14D33 572 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 INO80DQ53TQ3 878 aaPredicted RBP20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 DNAJC24Q6P3W2 148 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 PDZD3Q86UT5 571 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 SLC22A18ASQ8N1D0 253 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 RTL3Q8N8U3 475 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 HNRNPLLQ8WVV9 542 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 EPAS1Q99814 870 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 CLCA2Q9UQC9 943 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 ACTL7AQ9Y615 435 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 CHD5Q8TDI0 1954 aa20.28■□□□□ 0.84
UBE2D3-220ENST00000505307 SPTY2D1-AS1A0A0U1RR47 76 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 H3BM21 787 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 KRIT1O00522 736 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 SCAMP1O15126 338 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 BUB1O43683 1085 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 CKMT1AP12532 417 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 FERP16591 822 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 EPHB2P29323 1055 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 HTR7P34969 479 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 DUSP3P51452 185 aaPredicted RBP20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 FGL2Q14314 439 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 FAM181AQ8N9Y4 354 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 GDAP1L1Q96MZ0 367 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 CNPY3Q9BT09 278 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 CATSPERBQ9H7T0 1116 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 UCKL1Q9NWZ5 548 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 DNAJC28Q9NX36 388 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 IPO11Q9UI26 975 aaKnown RBP20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 CSNK1G3Q9Y6M4 447 aa20.27■□□□□ 0.84
UBE2D3-220ENST00000505307 TCRBV5S1A1TA0A578 114 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms