RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 KIR2DS3K7RE56 304 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 PPP6CO00743 305 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 FIBPO43427 364 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 WNT1P04628 370 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 EIF2S1P05198 315 aaKnown RBP5.75□□□□□ -1.49
SSR3-208ENST00000496050 HEXAP06865 529 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 ICAM3P32942 547 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 OLR1P78380 273 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 NHLH1Q02575 133 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 CFHR1Q03591 330 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 TOMM20Q15388 145 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 DPCR1Q3MIW9 517 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 SYTL3Q4VX76 610 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 MIDNQ504T8 468 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 RILPL1Q5EBL4 403 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 TBC1D9BQ66K14 1250 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 NCAPH2Q6IBW4 605 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 FAM83HQ6ZRV2 1179 aaPredicted RBP5.75□□□□□ -1.49
SSR3-208ENST00000496050 ZDHHC23Q8IYP9 409 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 TTC39CQ8N584 583 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 CMASQ8NFW8 434 aaPredicted RBP5.75□□□□□ -1.49
SSR3-208ENST00000496050 WIPF2Q8TF74 440 aaPredicted RBP5.75□□□□□ -1.49
SSR3-208ENST00000496050 POMGNT1Q8WZA1 660 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 ARHGEF2Q92974 986 aaKnown RBP5.75□□□□□ -1.49
SSR3-208ENST00000496050 FAM149B1Q96BN6 582 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 SH2D3AQ9BRG2 576 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 SEMA4CQ9C0C4 833 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 RNF146Q9NTX7 359 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 NCKIPSDQ9NZQ3 722 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 HAO1Q9UJM8 370 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 CORO1CQ9ULV4 474 aaPredicted RBP5.75□□□□□ -1.49
SSR3-208ENST00000496050 TTLL3Q9Y4R7 772 aa5.75□□□□□ -1.49
SSR3-208ENST00000496050 A0A096LPK6 155 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 TRBV5-7A0A0A0MS05 114 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 FAM237BA0A1B0GVD1 139 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 MYO1GB0I1T2 1018 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 HNRNPCL1O60812 293 aaKnown RBP5.74□□□□□ -1.49
SSR3-208ENST00000496050 TSPAN9O75954 239 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 LATS1O95835 1130 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 CTSAP10619 480 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 PCNAP12004 261 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 CDH2P19022 906 aaPredicted RBP5.74□□□□□ -1.49
SSR3-208ENST00000496050 BMP5P22003 454 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 PTGER1P34995 402 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 GPR12P47775 334 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 PRAMEP78395 509 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 CUL4AQ13619 759 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 PPP2R5BQ15173 497 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 CEP78Q5JTW2 689 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 SERPINA11Q86U17 422 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 DDIASQ8IXT1 998 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 SLC25A41Q8N5S1 370 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 FRMD1Q8N878 549 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 SLC16A11Q8NCK7 471 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 OR4N2Q8NGD1 307 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 RASSF8Q8NHQ8 419 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 SCFD2Q8WU76 684 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 ZNF419Q96HQ0 510 aaPredicted RBP5.74□□□□□ -1.49
SSR3-208ENST00000496050 ZNF333Q96JL9 665 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 SIGLEC11Q96RL6 698 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 SCAND2PQ9GZW5 306 aaPredicted RBP5.74□□□□□ -1.49
SSR3-208ENST00000496050 PDGFCQ9NRA1 345 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 ZNF70Q9UC06 446 aaPredicted RBP5.74□□□□□ -1.49
SSR3-208ENST00000496050 AGO2Q9UKV8 859 aaKnown RBP5.74□□□□□ -1.49
SSR3-208ENST00000496050 RAP2CQ9Y3L5 183 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 ADGRF5Q8IZF2 1346 aa5.74□□□□□ -1.49
SSR3-208ENST00000496050 TYW5A2RUC4 315 aaKnown RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 DDTLA6NHG4 134 aaPredicted RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 LIPT2A6NK58 231 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 USP17L23D6RBM5 183 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 TAF4O00268 1085 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 BCAT2O15382 392 aaPredicted RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 TIMM44O43615 452 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 SLC25A17O43808 307 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 RFC1P35251 1148 aaPredicted RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 PPARGP37231 505 aaPredicted RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 CENPAP49450 140 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 SLC18A2Q05940 514 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 RUNX2Q13950 521 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 CRYMQ14894 314 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 MED22Q15528 200 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 TXNDC8Q6A555 127 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 TTI2Q6NXR4 508 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 NCEH1Q6PIU2 408 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 RD3Q7Z3Z2 195 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 TBC1D26Q86UD7 250 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 TICAM2Q86XR7 235 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 TMEM116Q8NCL8 245 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 ATOH1Q92858 354 aaPredicted RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 NSUN4Q96CB9 384 aaKnown RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 FTOQ9C0B1 505 aaKnown RBP eCLIP5.73□□□□□ -1.49
SSR3-208ENST00000496050 KAT14Q9H8E8 782 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 PNRC2Q9NPJ4 139 aaKnown RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 CLIC5Q9NZA1 410 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 KLHL13Q9P2N7 655 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 NRBP1Q9UHY1 535 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 SLCO3A1Q9UIG8 710 aa5.73□□□□□ -1.49
SSR3-208ENST00000496050 INTS6Q9UL03 887 aaKnown RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 ZNF215Q9UL58 517 aaPredicted RBP5.73□□□□□ -1.49
SSR3-208ENST00000496050 FAM96BQ9Y3D0 163 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms