RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 CCT8P50990 548 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 NEK3P51956 506 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 GEMIN4P57678 1058 aaKnown RBP16.11■□□□□ 0.17
GABPA-203ENST00000487266 ZNF423Q2M1K9 1284 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 PARP15Q460N3 678 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 CCDC122Q5T0U0 273 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 ARHGAP36Q6ZRI8 547 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 PRPF39Q86UA1 669 aaKnown RBP16.11■□□□□ 0.17
GABPA-203ENST00000487266 VPS36Q86VN1 386 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 HSPH1Q92598 858 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 ISG20Q96AZ6 181 aaKnown RBP16.11■□□□□ 0.17
GABPA-203ENST00000487266 IQCDQ96DY2 449 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 PPP1R16AQ96I34 528 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 PACSIN1Q9BY11 444 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 HDAC8Q9BY41 377 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 SLC39A8Q9C0K1 460 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 PDFQ9HBH1 243 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 ANAPC7Q9UJX3 599 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 ANGPTL2Q9UKU9 493 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 PCOLCE2Q9UKZ9 415 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 WASF3Q9UPY6 502 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.11■□□□□ 0.17
GABPA-203ENST00000487266 WDFY3Q8IZQ1 3526 aa16.11■□□□□ 0.17
GABPA-203ENST00000487266 CHD8Q9HCK8 2581 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 SHROOM3Q8TF72 1996 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 SPINT1O43278 529 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 PCDH8O95206 1070 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 CYP1A2P05177 515 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 TPM3P06753 285 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 ERCC2P18074 760 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 RHOAP61586 193 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 SNRPD1P62314 119 aaKnown RBP16.1■□□□□ 0.17
GABPA-203ENST00000487266 DPYSQ14117 519 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 FGL2Q14314 439 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 SHBQ15464 509 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 TRIP6Q15654 476 aaKnown RBP16.1■□□□□ 0.17
GABPA-203ENST00000487266 ZNF284Q2VY69 593 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 SETMARQ53H47 684 aaPredicted RBP16.1■□□□□ 0.17
GABPA-203ENST00000487266 ALKBH5Q6P6C2 394 aaKnown RBP16.1■□□□□ 0.17
GABPA-203ENST00000487266 HORMAD1Q86X24 394 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 SPATS2Q86XZ4 545 aaKnown RBP16.1■□□□□ 0.17
GABPA-203ENST00000487266 GATAD2AQ86YP4 633 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 ARHGAP12Q8IWW6 846 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 CWC15Q9P013 229 aaKnown RBP16.1■□□□□ 0.17
GABPA-203ENST00000487266 LHX3Q9UBR4 397 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 FADS3Q9Y5Q0 445 aa16.1■□□□□ 0.17
GABPA-203ENST00000487266 ACACBO00763 2458 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 LRRK1Q38SD2 2015 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 A0A1B0GTQ1 180 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 CXorf51AA0A1B0GTR3 108 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 ZSCAN5CA6NGD5 496 aaPredicted RBP16.09■□□□□ 0.17
GABPA-203ENST00000487266 DAPK3O43293 454 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 HYAL3O43820 417 aaPredicted RBP16.09■□□□□ 0.17
GABPA-203ENST00000487266 PIGNO95427 931 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 HNRNPH3P31942 346 aaKnown RBP16.09■□□□□ 0.17
GABPA-203ENST00000487266 PCK1P35558 622 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 PAPOLAP51003 745 aaKnown RBP16.09■□□□□ 0.17
GABPA-203ENST00000487266 CLDN2P57739 230 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 NXPH1P58417 271 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 YBEYP58557 167 aaPredicted RBP16.09■□□□□ 0.17
GABPA-203ENST00000487266 SLC25A11Q02978 314 aaKnown RBP16.09■□□□□ 0.17
GABPA-203ENST00000487266 CYTH1Q15438 398 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 MYLK3Q32MK0 819 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 SPECC1LQ69YQ0 1117 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 FBXL19Q6PCT2 694 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 KDM7AQ6ZMT4 941 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 VSTM4Q8IW00 320 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 PNPLA1Q8N8W4 532 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 TMEM145Q8NBT3 493 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 BAHD1Q8TBE0 780 aaPredicted RBP16.09■□□□□ 0.17
GABPA-203ENST00000487266 GDAP1L1Q96MZ0 367 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 KLHL32Q96NJ5 620 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 DNAJC7Q99615 494 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.09■□□□□ 0.17
GABPA-203ENST00000487266 ETNK2Q9NVF9 386 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 UBA2Q9UBT2 640 aaPredicted RBP16.09■□□□□ 0.17
GABPA-203ENST00000487266 PCDHB9Q9Y5E1 797 aa16.09■□□□□ 0.17
GABPA-203ENST00000487266 MAP1BP46821 2468 aaKnown RBP16.08■□□□□ 0.17
GABPA-203ENST00000487266 TDRD6O60522 2096 aaKnown RBP16.08■□□□□ 0.16
GABPA-203ENST00000487266 C16orf96A6NNT2 1141 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 TLR4O00206 839 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 DFFAO00273 331 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 FLRT2O43155 660 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 CBFA2T2O43439 604 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 PRAMEF11O60813 436 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 IGSF6O95976 241 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 RARAP10276 462 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 ITIH2P19823 946 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 HTR7P34969 479 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 GJC1P36383 396 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 RGRP47804 291 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 NDST2P52849 883 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 SHC2P98077 582 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
GABPA-203ENST00000487266 DPYSL2Q16555 572 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 TMEM259Q4ZIN3 620 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 ZNF805Q5CZA5 627 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 AFMIDQ63HM1 303 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 DBX2Q6ZNG2 339 aa16.08■□□□□ 0.16
GABPA-203ENST00000487266 PLPP6Q8IY26 295 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms