RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-204ENST00000478061 BCKDHBP21953 392 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 HSPA9P38646 679 aaKnown RBP12.98□□□□□ -0.33
RBM28-204ENST00000478061 MMP13P45452 471 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 CSNK1DP48730 415 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 RENBPP51606 427 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 ZNF33AQ06730 810 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 NSUN2Q08J23 767 aaKnown RBP eCLIP12.98□□□□□ -0.33
RBM28-204ENST00000478061 AP1B1Q10567 949 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 KLF1Q13351 362 aaPredicted RBP12.98□□□□□ -0.33
RBM28-204ENST00000478061 ZNF235Q14590 738 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 PRKD1Q15139 912 aaPredicted RBP12.98□□□□□ -0.33
RBM28-204ENST00000478061 POM121L1PQ3SYA9 428 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 TTC31Q49AM3 519 aaPredicted RBP12.98□□□□□ -0.33
RBM28-204ENST00000478061 MARC1Q5VT66 337 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 USP30Q70CQ3 517 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 FAM124AQ86V42 546 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 SPACA7Q96KW9 195 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 CARD9Q9H257 536 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 ZDHHC6Q9H6R6 413 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 KCND1Q9NSA2 647 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 FBXL12Q9NXK8 326 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 SERGEFQ9UGK8 458 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 JRKLQ9Y4A0 524 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 ARIH1Q9Y4X5 557 aaPredicted RBP12.98□□□□□ -0.33
RBM28-204ENST00000478061 GPR179Q6PRD1 2367 aa12.98□□□□□ -0.33
RBM28-204ENST00000478061 A0A1W2PP55 124 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 TCRBV7S2A1N4TA0A589 114 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 KCNK1O00180 336 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 KPNA3O00505 521 aaPredicted RBP12.97□□□□□ -0.33
RBM28-204ENST00000478061 ENC1O14682 589 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 GJB3O75712 270 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 JCHAINP01591 159 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 CR2P20023 1033 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 CD6P30203 668 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 OXTRP30559 389 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 DRD3P35462 400 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 NBL1P41271 181 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 IFI35P80217 286 aaPredicted RBP12.97□□□□□ -0.33
RBM28-204ENST00000478061 NHLH1Q02575 133 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 RAD51Q06609 339 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 SIM2Q14190 667 aaPredicted RBP12.97□□□□□ -0.33
RBM28-204ENST00000478061 NOMO1Q15155 1222 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 SEL1L2Q5TEA6 688 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 CEP68Q76N32 757 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 SRLQ86TD4 932 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 SLC13A5Q86YT5 568 aaPredicted RBP12.97□□□□□ -0.33
RBM28-204ENST00000478061 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 C17orf53Q8N3J3 647 aaPredicted RBP12.97□□□□□ -0.33
RBM28-204ENST00000478061 HDDC3Q8N4P3 179 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 GANCQ8TET4 914 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 TFB1MQ8WVM0 346 aaKnown RBP12.97□□□□□ -0.33
RBM28-204ENST00000478061 ARRDC3Q96B67 414 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 TOE1Q96GM8 510 aaKnown RBP12.97□□□□□ -0.33
RBM28-204ENST00000478061 LRIG1Q96JA1 1093 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 QKIQ96PU8 341 aaKnown RBP eCLIP12.97□□□□□ -0.332e-8■■■■■ 47.1
RBM28-204ENST00000478061 IL12RB2Q99665 862 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 MGME1Q9BQP7 344 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 CPEB1Q9BZB8 566 aaKnown RBP12.97□□□□□ -0.33
RBM28-204ENST00000478061 NEUROG2Q9H2A3 272 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 EPC1Q9H2F5 836 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 NT5MQ9NPB1 228 aa12.97□□□□□ -0.33
RBM28-204ENST00000478061 RBM22Q9NW64 420 aaKnown RBP eCLIP12.97□□□□□ -0.336e-9■■■■■ 50.1
RBM28-204ENST00000478061 WSB2Q9NYS7 404 aaPredicted RBP12.97□□□□□ -0.33
RBM28-204ENST00000478061 SDK1Q7Z5N4 2213 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 TTC24A2A3L6 582 aaPredicted RBP12.96□□□□□ -0.33
RBM28-204ENST00000478061 HACD1B0YJ81 288 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 MAP3K13O43283 966 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 RNASEH2AO75792 299 aaKnown RBP12.96□□□□□ -0.33
RBM28-204ENST00000478061 PIGNO95427 931 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 ATP1A1P05023 1023 aaKnown RBP12.96□□□□□ -0.33
RBM28-204ENST00000478061 UGT2B4P06133 528 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 ITGB7P26010 798 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 SCNN1BP51168 640 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 MAXP61244 160 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 OTUD4Q01804 1114 aaKnown RBP12.96□□□□□ -0.33
RBM28-204ENST00000478061 CNTN1Q12860 1018 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 SFSWAPQ12872 951 aaKnown RBP12.96□□□□□ -0.33
RBM28-204ENST00000478061 ZBTB17Q13105 803 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 XRCC4Q13426 336 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 PLK5Q496M5 336 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 SLC45A4Q5BKX6 768 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 FAM182AQ5T1J6 154 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 GDPD4Q6W3E5 623 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.96□□□□□ -0.33
RBM28-204ENST00000478061 SLC36A4Q6YBV0 504 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 KBTBD6Q86V97 674 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 C11orf74Q86VG3 221 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 ZC3H18Q86VM9 953 aaKnown RBP12.96□□□□□ -0.33
RBM28-204ENST00000478061 CNTD1Q8N815 330 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 FAM131CQ96AQ9 280 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 NSMCE3Q96MG7 304 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 NUDCD1Q96RS6 583 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 OMDQ99983 421 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 FAM118BQ9BPY3 351 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 OSBPL1AQ9BXW6 950 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 AMACRQ9UHK6 382 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 FZD4Q9ULV1 537 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 NCKAP1Q9Y2A7 1128 aa12.96□□□□□ -0.33
RBM28-204ENST00000478061 R3HDM2Q9Y2K5 976 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms