RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PRCCQ92733 491 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 LRIG1Q96JA1 1093 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 CINPQ9BW66 212 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 TNKS2Q9H2K2 1166 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 USP36Q9P275 1121 aaKnown RBP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 BCCIPQ9P287 314 aaKnown RBP eCLIP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 SAE1Q9UBE0 346 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 PPM1HQ9ULR3 514 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 HACD1B0YJ81 288 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 ENC1O14682 589 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 AXIN1O15169 862 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 HRO43593 1189 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZNF217O75362 1048 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZNF189O75820 626 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 IGSF6O95976 241 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 ADH1BP00325 375 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 PRNPP04156 253 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 MAPK8P45983 427 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 CSNK1DP48730 415 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 CCNHP51946 323 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 IFI35P80217 286 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 NSUN2Q08J23 767 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 SLC10A7Q0GE19 358 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZNF235Q14590 738 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 CST6Q15828 149 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 MARC1Q5VT66 337 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 ALG1LQ6GMV1 187 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 DPY19L3Q6ZPD9 716 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 STK40Q8N2I9 435 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 TSEN2Q8NCE0 465 aaKnown RBP15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 CCNYQ8ND76 341 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 TMIEQ8NEW7 156 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 VOPP1Q96AW1 172 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 SIPA1Q96FS4 1042 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZNF419Q96HQ0 510 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 QKIQ96PU8 341 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 LGMNQ99538 433 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 MGME1Q9BQP7 344 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 TM6SF2Q9BZW4 377 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 HAUS2Q9NVX0 235 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 IL36AQ9UHA7 158 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 WASF2Q9Y6W5 498 aa15.16■□□□□ 0.02
CDC42SE1-203ENST00000470278 C1QTNF3-AMACRE9PGA6 284 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CES2O00748 559 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 MTSS1O43312 755 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 ATP1A1P05023 1023 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CTSLP07711 333 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CCNB1P14635 433 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CR2P20023 1033 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 C5AR1P21730 350 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CHRNA3P32297 505 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CNR2P34972 360 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 MMP13P45452 471 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 FNTBP49356 437 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 OTUD4Q01804 1114 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 TTC31Q49AM3 519 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 RALGPS1Q5JS13 557 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CCDC181Q5TID7 509 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 FAM46CQ5VWP2 391 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 SLC13A5Q86YT5 568 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 ACTL9Q8TC94 416 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 TFB1MQ8WVM0 346 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 FAM131CQ96AQ9 280 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 TRIM44Q96DX7 344 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CNTNAP3BQ96NU0 1288 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 IL12RB2Q99665 862 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 HEPHQ9BQS7 1158 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 OSBPL1AQ9BXW6 950 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 FRMD8P1Q9BZ68 369 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CNTNAP3Q9BZ76 1288 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 CPEB1Q9BZB8 566 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 SLC6A17Q9H1V8 727 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 HECAQ9UBI9 543 aaPredicted RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZKSCAN5Q9Y2L8 839 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 AKAP13Q12802 2813 aa15.15■□□□□ 0.02
CDC42SE1-203ENST00000470278 DCDC2BA2VCK2 349 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 MUSKO15146 869 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 POP4O95707 220 aaKnown RBP15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 DNTTP04053 509 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 P2RY2P41231 377 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 PXNP49023 591 aaPredicted RBP15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 GNG11P61952 73 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 AP1S1P61966 158 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 SPEM2Q0P670 501 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 AP1B1Q10567 949 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 SFSWAPQ12872 951 aaKnown RBP15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 BYSLQ13895 437 aaKnown RBP15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 GRM3Q14832 879 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 MYLK3Q32MK0 819 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 SLC45A4Q5BKX6 768 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 KIAA1324Q6UXG2 1013 aaKnown RBP15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 USP30Q70CQ3 517 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 KBTBD6Q86V97 674 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 MMAAQ8IVH4 418 aaKnown RBP15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 CHST14Q8NCH0 376 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 HAUS1Q96CS2 278 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 PBKQ96KB5 322 aa15.14■□□□□ 0.01
CDC42SE1-203ENST00000470278 TUBGCP5Q96RT8 1024 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms