RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 TTC4O95801 387 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ATP5BP06576 529 aaKnown RBP12.93□□□□□ -0.34
TRAF4-208ENST00000469529 SRPRAP08240 638 aaKnown RBP12.93□□□□□ -0.34
TRAF4-208ENST00000469529 GSTA2P09210 222 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ARSAP15289 507 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 GLDCP23378 1020 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 MAGEA4P43358 317 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 DGKGP49619 791 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 PMS2P54278 862 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 SKOR1P84550 965 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ECT2LQ008S8 904 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ZP2Q05996 745 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ZNF235Q14590 738 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 E2F5Q15329 346 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 KCTD19Q17RG1 926 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ITPRIPL2Q3MIP1 535 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 DNAJC21Q5F1R6 531 aaKnown RBP12.93□□□□□ -0.34
TRAF4-208ENST00000469529 FNBP1LQ5T0N5 605 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 TRIM68Q6AZZ1 485 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ZNF534Q76KX8 674 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ADHFE1Q8IWW8 467 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 PHTF2Q8N3S3 785 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 TSEN2Q8NCE0 465 aaKnown RBP12.93□□□□□ -0.34
TRAF4-208ENST00000469529 USP33Q8TEY7 942 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 MRGPRX2Q96LB1 330 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 SIGLEC10Q96LC7 697 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 TTC25Q96NG3 672 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 CEP41Q9BYV8 373 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 EBF3Q9H4W6 596 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 EPHX3Q9H6B9 360 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 NT5MQ9NPB1 228 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 TEX264Q9Y6I9 313 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 NUP205Q92621 2012 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 SDR42E2A6NKP2 422 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 TMCC1O94876 653 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 GSRP00390 522 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 MT-CO1P00395 513 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 SERPINF2P08697 491 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 ABHD2P08910 425 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 POLR2EP19388 210 aaKnown RBP12.92□□□□□ -0.34
TRAF4-208ENST00000469529 GJA4P35212 333 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 AP1S1P61966 158 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 CDH17Q12864 832 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 IHHQ14623 411 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 CASP8Q14790 479 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 FUT11Q495W5 492 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 CFAP58Q5T655 872 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 FAXCQ5TGI0 409 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 TMEM215Q68D42 235 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 MBLAC2Q68D91 279 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 DENND5AQ6IQ26 1287 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 GSPT2Q8IYD1 628 aaKnown RBP12.92□□□□□ -0.34
TRAF4-208ENST00000469529 SH2D3CQ8N5H7 860 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 PCDH20Q8N6Y1 951 aaKnown RBP12.92□□□□□ -0.34
TRAF4-208ENST00000469529 NUP210Q8TEM1 1887 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-208ENST00000469529 BHMTQ93088 406 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 FEM1CQ96JP0 617 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 SEMA3CQ99985 751 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 RPP25Q9BUL9 199 aaKnown RBP12.92□□□□□ -0.34
TRAF4-208ENST00000469529 CINPQ9BW66 212 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-208ENST00000469529 CPEB1Q9BZB8 566 aaKnown RBP12.92□□□□□ -0.34
TRAF4-208ENST00000469529 SEMA4AQ9H3S1 761 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 ZNF446Q9NWS9 450 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 LHX3Q9UBR4 397 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 STARD13Q9Y3M8 1113 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 NUMBLQ9Y6R0 609 aa12.92□□□□□ -0.34
TRAF4-208ENST00000469529 HELZP42694 1942 aaKnown RBP12.92□□□□□ -0.34
TRAF4-208ENST00000469529 C2orf16Q68DN1 1984 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 BDP1A6H8Y1 2624 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 NPC1O15118 1278 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 SPAG6O75602 509 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 TCEA3O75764 348 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 DLDP09622 509 aaKnown RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 NUDT17P0C025 328 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 SRCP12931 536 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 GLULP15104 373 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 GDI1P31150 447 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 HSD17B3P37058 310 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 OPRD1P41143 372 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 LMAN1P49257 510 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 WNT3AP56704 352 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 RPL26P61254 145 aaKnown RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 PDIA2Q13087 525 aaKnown RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 MSLNQ13421 630 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 FRG1Q14331 258 aaKnown RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 GRM3Q14832 879 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 MSS51Q4VC12 460 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 CCDC38Q502W7 563 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 GRAMD4Q6IC98 578 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 ZNF449Q6P9G9 518 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 NCEH1Q6PIU2 408 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 NUDT18Q6ZVK8 323 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 SRLQ86TD4 932 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 SPATA22Q8NHS9 363 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 PTCD2Q8WV60 388 aaKnown RBP12.91□□□□□ -0.34
TRAF4-208ENST00000469529 DNASE1L2Q92874 299 aa12.91□□□□□ -0.34
TRAF4-208ENST00000469529 ZFYVE19Q96K21 471 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms