RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 DCDC2BA2VCK2 349 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 LRRC72A6NJI9 287 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 INSIG1O15503 277 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 BUB1O43683 1085 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 BNIP3LO60238 219 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 FSBPO95073 299 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 WNT1P04628 370 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 CFIP05156 583 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 ARHGAP25P42331 645 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 RGRP47804 291 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 HADHBP55084 474 aaKnown RBP13.19□□□□□ -0.3
PTMA-211ENST00000468027 GRIK2Q13002 908 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 DPYSL3Q14195 570 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 TSR1Q2NL82 804 aaKnown RBP13.19□□□□□ -0.3
PTMA-211ENST00000468027 MYLK3Q32MK0 819 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 ATXN7L2Q5T6C5 722 aaPredicted RBP13.19□□□□□ -0.3
PTMA-211ENST00000468027 ERN2Q76MJ5 926 aaKnown RBP13.19□□□□□ -0.3
PTMA-211ENST00000468027 ERMP1Q7Z2K6 904 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 OR2I1PQ8NGU4 316 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 GRIN3AQ8TCU5 1115 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 RFFLQ8WZ73 363 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 LRIG1Q96JA1 1093 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 DONSONQ9NYP3 566 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 RCOR3Q9P2K3 495 aaPredicted RBP13.19□□□□□ -0.3
PTMA-211ENST00000468027 LCMT1Q9UIC8 334 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 ZFR2Q9UPR6 939 aaKnown RBP13.19□□□□□ -0.3
PTMA-211ENST00000468027 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
PTMA-211ENST00000468027 PLXNB3Q9ULL4 1909 aa13.19□□□□□ -0.3
PTMA-211ENST00000468027 ARHGAP42A6NI28 874 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 C3orf70A6NLC5 250 aaPredicted RBP13.18□□□□□ -0.3
PTMA-211ENST00000468027 UPK3BL1B0FP48 263 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 UPK3BL2E5RIL1 263 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 H3BRJ5 948 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
PTMA-211ENST00000468027 MUSKO15146 869 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 MAFKO60675 156 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 POP4O95707 220 aaKnown RBP13.18□□□□□ -0.3
PTMA-211ENST00000468027 GNSP15586 552 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 GRIA4P48058 902 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 CSNK1EP49674 416 aaKnown RBP13.18□□□□□ -0.3
PTMA-211ENST00000468027 SNRPD1P62314 119 aaKnown RBP13.18□□□□□ -0.3
PTMA-211ENST00000468027 IL10RBQ08334 325 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 TMEM259Q4ZIN3 620 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 DBX2Q6ZNG2 339 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 PARS2Q7L3T8 475 aaKnown RBP13.18□□□□□ -0.3
PTMA-211ENST00000468027 PIP4P1Q86T03 277 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 RHOT2Q8IXI1 618 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 CCDC170Q8IYT3 715 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 MINDY1Q8N5J2 469 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 OR6K2Q8NGY2 324 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 PCDH19Q8TAB3 1148 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 GANCQ8TET4 914 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 CPEB1Q9BZB8 566 aaKnown RBP13.18□□□□□ -0.3
PTMA-211ENST00000468027 MIR1-1HGQ9H1L0 117 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 PREBQ9HCU5 417 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 UBA2Q9UBT2 640 aaPredicted RBP13.18□□□□□ -0.3
PTMA-211ENST00000468027 TFR2Q9UP52 801 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 REXO2Q9Y3B8 237 aaKnown RBP13.18□□□□□ -0.3
PTMA-211ENST00000468027 SCN8AQ9UQD0 1980 aa13.18□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3DA0A087WVF3 549 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3IA0A087WXS9 549 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3EA0A087X179 549 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3KA0A087X1G2 549 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 RCCD1A6NED2 376 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3FA6NER0 549 aaPredicted RBP13.17□□□□□ -0.3
PTMA-211ENST00000468027 FAM47DPA6NHR8 397 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3LB9A6J9 549 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 AREL1O15033 823 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 AP1G1O43747 822 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 BUB1BO60566 1050 aaPredicted RBP13.17□□□□□ -0.3
PTMA-211ENST00000468027 SYPP08247 313 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3HP0C7X1 549 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 ADRB3P13945 408 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 CD59P13987 128 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 CDC25BP30305 580 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 ARL4AP40617 200 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 ABL2P42684 1182 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 CTSKP43235 329 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 RECQLP46063 649 aaPredicted RBP13.17□□□□□ -0.3
PTMA-211ENST00000468027 CSNK1DP48730 415 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 AFF3P51826 1226 aaKnown RBP13.17□□□□□ -0.3
PTMA-211ENST00000468027 CDH6P55285 790 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 RACK1P63244 317 aaKnown RBP13.17□□□□□ -0.3
PTMA-211ENST00000468027 FGL2Q14314 439 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 PAFAH1B3Q15102 231 aaKnown RBP13.17□□□□□ -0.3
PTMA-211ENST00000468027 ZNF284Q2VY69 593 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 ZNF805Q5CZA5 627 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 NCBP2-AS2Q69YL0 99 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3GQ6DHY5 549 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3CQ6IPX1 549 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 NEK5Q6P3R8 708 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 LAYNQ6UX15 382 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 DGLUCYQ7Z3D6 616 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TBC1D3Q8IZP1 549 aaPredicted RBP13.17□□□□□ -0.3
PTMA-211ENST00000468027 PQLC3Q8N755 202 aa13.17□□□□□ -0.3
PTMA-211ENST00000468027 TSEN2Q8NCE0 465 aaKnown RBP13.17□□□□□ -0.3
PTMA-211ENST00000468027 ANP32BQ92688 251 aaKnown RBP13.17□□□□□ -0.3
PTMA-211ENST00000468027 SLC6A18Q96N87 628 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms