RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CACNA2D2Q9NY47 1150 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 TJP2Q9UDY2 1190 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 TESMINQ9Y4I5 508 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 RAD54BQ9Y620 910 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 PTPRJQ12913 1337 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 F5H423 210 aaPredicted RBP12.94□□□□□ -0.34
HERC3-203ENST00000407637 DDHD2O94830 711 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 KCNK2O95069 426 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 PIGNO95427 931 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 SNAP29O95721 258 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 DLGAP3O95886 979 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 HTR1BP28222 390 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 CD40LGP29965 261 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 RARRES1P49788 294 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 RPL14P50914 215 aaKnown RBP12.94□□□□□ -0.34
HERC3-203ENST00000407637 GNG2P59768 71 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 IRF9Q00978 393 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 CBLBQ13191 982 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 KIZQ2M2Z5 673 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 SLX4IPQ5VYV7 408 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 ASCC1Q8N9N2 400 aaKnown RBP12.94□□□□□ -0.34
HERC3-203ENST00000407637 VPS33AQ96AX1 596 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 SLC39A3Q9BRY0 314 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 C9orf16Q9BUW7 83 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 CPNE5Q9HCH3 593 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 SNX15Q9NRS6 342 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 RAP2CQ9Y3L5 183 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 CDK2AP1O14519 115 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 TRIM13O60858 407 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 VNN1O95497 513 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 NADKO95544 446 aaPredicted RBP12.93□□□□□ -0.34
HERC3-203ENST00000407637 ARSAP15289 507 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 TNNI1P19237 187 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 SHMT1P34896 483 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 STX1BP61266 288 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 PPIL2Q13356 520 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 SLFN13Q68D06 897 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.93□□□□□ -0.34
HERC3-203ENST00000407637 ESX1Q8N693 406 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 PQLC3Q8N755 202 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 BEND7Q8N7W2 519 aaPredicted RBP12.93□□□□□ -0.34
HERC3-203ENST00000407637 SLC4A11Q8NBS3 891 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.93□□□□□ -0.34
HERC3-203ENST00000407637 MTMR12Q9C0I1 747 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 OR2B2Q9GZK3 357 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 AGPAT4Q9NRZ5 378 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 MTMR10Q9NXD2 777 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 SMPD3Q9NY59 655 aaPredicted RBP12.93□□□□□ -0.34
HERC3-203ENST00000407637 SNTG2Q9NY99 539 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 CD300AQ9UGN4 299 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 SLCO3A1Q9UIG8 710 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 ZDHHC2Q9UIJ5 367 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 GGA1Q9UJY5 639 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 GREB1LQ9C091 1923 aaPredicted RBP12.93□□□□□ -0.34
HERC3-203ENST00000407637 ZFC3H1O60293 1989 aaKnown RBP12.93□□□□□ -0.34
HERC3-203ENST00000407637 KPNA7A9QM74 516 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 ACOX3O15254 700 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 RASAL1O95294 804 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 VDRP11473 427 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 SPNP16150 400 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 ALDH4A1P30038 563 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 HSPA2P54652 639 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 MPP1Q00013 466 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 TAP1Q03518 808 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 VAC14Q08AM6 782 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 CDC20Q12834 499 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 PDK2Q15119 407 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 SNAP47Q5SQN1 464 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 FAM102BQ5T8I3 360 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 MAP4K3Q8IVH8 894 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 EXOC8Q8IYI6 725 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 GPD1LQ8N335 351 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 SFRP1Q8N474 314 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 PSMA8Q8TAA3 256 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 MAGEE2Q8TD90 523 aaPredicted RBP12.93□□□□□ -0.34
HERC3-203ENST00000407637 VMP1Q96GC9 406 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 TEKT3Q9BXF9 490 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 WDR11Q9BZH6 1224 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 MAGEE1Q9HCI5 957 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 ABCB10Q9NRK6 738 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 GAKO14976 1311 aa12.93□□□□□ -0.34
HERC3-203ENST00000407637 ABCB7O75027 752 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 METTL18O95568 372 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 TFEBP19484 476 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 SMU1Q2TAY7 513 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 EML3Q32P44 896 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 ARL13AQ5H913 290 aaPredicted RBP12.92□□□□□ -0.34
HERC3-203ENST00000407637 TMEM236Q5W0B7 351 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 TFAP2DQ7Z6R9 452 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 DDIASQ8IXT1 998 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 CMTR2Q8IYT2 770 aaKnown RBP12.92□□□□□ -0.34
HERC3-203ENST00000407637 TMEM161BQ8NDZ6 487 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 ST6GALNAC4Q9H4F1 302 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 DHX35Q9H5Z1 703 aaKnown RBP12.92□□□□□ -0.34
HERC3-203ENST00000407637 DHRS12A0PJE2 317 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 LRRIQ4A6NIV6 560 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 TBKBP1A7MCY6 615 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 TMEM233B4DJY2 109 aa12.92□□□□□ -0.34
HERC3-203ENST00000407637 TMCC2O75069 709 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms