RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MAML3Q96JK9 1138 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 MYOCQ99972 504 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 FAM126AQ9BYI3 521 aaPredicted RBP16.56■□□□□ 0.24
PTCH1-201ENST00000331920 GGA3Q9NZ52 723 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 VPS4AQ9UN37 437 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 ZSCAN5CA6NGD5 496 aaPredicted RBP16.56■□□□□ 0.24
PTCH1-201ENST00000331920 ZMPSTE24O75844 475 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 MECP2P51608 486 aaKnown RBP16.56■□□□□ 0.24
PTCH1-201ENST00000331920 ZSCAN5AQ9BUG6 496 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 TELO2Q9Y4R8 837 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 CST1P01037 141 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 SQLEQ14534 574 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 PITRM1Q5JRX3 1037 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 LRRC69Q6ZNQ3 347 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 TCP10LQ8TDR4 215 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 CCNDBP1O95273 360 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 HUNKP57058 714 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 CWF19L1Q69YN2 538 aaKnown RBP16.56■□□□□ 0.24
PTCH1-201ENST00000331920 C16orf46Q6P387 395 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 CPNE1Q99829 537 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 HPF1Q9NWY4 346 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 R3HDM2Q9Y2K5 976 aaKnown RBP16.56■□□□□ 0.24
PTCH1-201ENST00000331920 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
PTCH1-201ENST00000331920 OR14I1A6ND48 311 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 PIK3CGP48736 1102 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 HKDC1Q2TB90 917 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 PDCD4Q53EL6 469 aaKnown RBP16.55■□□□□ 0.24
PTCH1-201ENST00000331920 BROXQ5VW32 411 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 KCNF1Q9H3M0 494 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 CCDC86Q9H6F5 360 aaKnown RBP16.55■□□□□ 0.24
PTCH1-201ENST00000331920 DAGLAQ9Y4D2 1042 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 ECHS1P30084 290 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 MAZP56270 477 aaKnown RBP16.55■□□□□ 0.24
PTCH1-201ENST00000331920 POF1BQ8WVV4 589 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 PANX3Q96QZ0 392 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 MXRA8Q9BRK3 442 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 CDHR5Q9HBB8 845 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 FBXO28Q9NVF7 368 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 THAP1Q9NVV9 213 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 PCDHB9Q9Y5E1 797 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 RPS6KA4O75676 772 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 CLCN3P51790 818 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 MTA1Q13330 715 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 APTXQ7Z2E3 356 aaKnown RBP16.55■□□□□ 0.24
PTCH1-201ENST00000331920 RASAL3Q86YV0 1011 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 CCNB2O95067 398 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 TOR1AIP1Q5JTV8 583 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 ZNF549Q6P9A3 640 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 GALNT5Q7Z7M9 940 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 SPERTQ8NA61 448 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 LSM14AQ8ND56 463 aaKnown RBP16.55■□□□□ 0.24
PTCH1-201ENST00000331920 ZNF350Q9GZX5 532 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 ALG9Q9H6U8 611 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 TMEM216Q9P0N5 145 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 XKRYO14609 159 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 FAM171A1Q5VUB5 890 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 TMPRSS6Q8IU80 811 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 CCDC28BQ9BUN5 200 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 TMBIM4Q9HC24 238 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 AASDHPPTQ9NRN7 309 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 CPSF4LA6NMK7 179 aaKnown RBP16.55■□□□□ 0.24
PTCH1-201ENST00000331920 GYPCP04921 128 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 PON1P27169 355 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 LHX1P48742 406 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 INTS11Q5TA45 600 aaKnown RBP16.55■□□□□ 0.24
PTCH1-201ENST00000331920 POLNQ7Z5Q5 900 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 SYNPOQ8N3V7 929 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 SPATA5L1Q9BVQ7 753 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 ELAC1Q9H777 363 aaKnown RBP16.55■□□□□ 0.24
PTCH1-201ENST00000331920 KCND2Q9NZV8 630 aa16.55■□□□□ 0.24
PTCH1-201ENST00000331920 ERAL1O75616 437 aaKnown RBP16.54■□□□□ 0.24
PTCH1-201ENST00000331920 POLR2LP62875 67 aaKnown RBP16.54■□□□□ 0.24
PTCH1-201ENST00000331920 PLA2G4EQ3MJ16 856 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 TTC7BQ86TV6 843 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.54■□□□□ 0.24
PTCH1-201ENST00000331920 SPANXN3Q5MJ09 141 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 TESCQ96BS2 214 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 ACE2Q9BYF1 805 aaPredicted RBP16.54■□□□□ 0.24
PTCH1-201ENST00000331920 KCNH7Q9NS40 1196 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 MATN4O95460 622 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 PPM1LQ5SGD2 360 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 TMLHEQ9NVH6 421 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 PLCL2Q9UPR0 1127 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 RECQL5O94762 991 aaPredicted RBP16.54■□□□□ 0.24
PTCH1-201ENST00000331920 FADS2O95864 444 aaKnown RBP16.54■□□□□ 0.24
PTCH1-201ENST00000331920 F9P00740 461 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 CDH3P22223 829 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 SNX20Q7Z614 316 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 SLC34A3Q8N130 599 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 FRMD8P1Q9BZ68 369 aaPredicted RBP16.54■□□□□ 0.24
PTCH1-201ENST00000331920 A0A096LPK6 155 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 TOP3AQ13472 1001 aaPredicted RBP16.54■□□□□ 0.24
PTCH1-201ENST00000331920 XKR6Q5GH73 641 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 SCIMPQ6UWF3 145 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 SPOCD1Q6ZMY3 1216 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 CKAP2Q8WWK9 683 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 PMEPA1Q969W9 287 aa16.54■□□□□ 0.24
PTCH1-201ENST00000331920 EHD1Q9H4M9 534 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms