RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 TRIM38O00635 465 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 RPLP2P05387 115 aaKnown RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 MRPS6P82932 125 aaKnown RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 MED8Q96G25 268 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 ZFP42Q96MM3 310 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 HMGXB4Q9UGU5 601 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 SLC25A13Q9UJS0 675 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 CORO1CQ9ULV4 474 aaPredicted RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 CLCA2Q9UQC9 943 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 C1orf232A0A0U1RR37 186 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 SOWAHBA6NEL2 793 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 C2CD4BA6NLJ0 364 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 TTLL13PA6NNM8 815 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 FOLH1Q04609 750 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 KHDC1Q4VXA5 237 aaKnown RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 TRMT10BQ6PF06 316 aaKnown RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 MARK2Q7KZI7 788 aaKnown RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 SIAH1Q8IUQ4 282 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 PPTC7Q8NI37 304 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 FBXO30Q8TB52 745 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 ASB2Q96Q27 587 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 CIPCQ9C0C6 399 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 RASSF9O75901 435 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 RTN3O95197 1032 aaPredicted RBP17.39■□□□□ 0.37
GABRB3-202ENST00000311550 HSMCR30P0CW71 290 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 ASPAP45381 313 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 WNT3AP56704 352 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 ELAVL2Q12926 359 aaKnown RBP17.39■□□□□ 0.37
GABRB3-202ENST00000311550 KLF10Q13118 480 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 ZNF284Q2VY69 593 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 MFSD3Q96ES6 412 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 CYLDQ9NQC7 956 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 SH3BP4Q9P0V3 963 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 RGPD2P0DJD1 1756 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 KDM3BQ7LBC6 1761 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 DLGAP3O95886 979 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 HGFP14210 728 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 ATP1A4Q13733 1029 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 CA9Q16790 459 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 DDR2Q16832 855 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 FAM45BPQ6NSW5 357 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 BNIPLQ7Z465 357 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 TMEM192Q8IY95 271 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 GLIS1Q8NBF1 620 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 FAM45AQ8TCE6 357 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 C7orf26Q96N11 449 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 ZYG11BQ9C0D3 744 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 HOXA2O43364 376 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 TSPAN1O60635 241 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 CABYRO75952 493 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 ABL2P42684 1182 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 EPHB3P54753 998 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 GALNT3Q14435 633 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 PCDH19Q8TAB3 1148 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 QKIQ96PU8 341 aaKnown RBP eCLIP17.39■□□□□ 0.37
GABRB3-202ENST00000311550 LPIN3Q9BQK8 851 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 BAZ2AQ9UIF9 1905 aaKnown RBP17.39■□□□□ 0.37
GABRB3-202ENST00000311550 TCRBV7S3A2A0A539 114 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 ARHGEF9O43307 516 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 IL1R2P27930 398 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 STARD3Q14849 445 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 TBC1D19Q8N5T2 526 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 BANPQ8N9N5 519 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 ANAPC2Q9UJX6 822 aa17.39■□□□□ 0.37
GABRB3-202ENST00000311550 MOXD2PA6NHM9 499 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 LZTS3O60299 673 aaPredicted RBP17.38■□□□□ 0.37
GABRB3-202ENST00000311550 UGT1A9O60656 530 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 SIN3BO75182 1162 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 BCL10O95999 233 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 ALOX15P16050 662 aaPredicted RBP17.38■□□□□ 0.37
GABRB3-202ENST00000311550 CD52P31358 61 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 ICAM3P32942 547 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 ZIK1Q3SY52 487 aaPredicted RBP17.38■□□□□ 0.37
GABRB3-202ENST00000311550 FAM9CQ8IZT9 166 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 TOP6BLQ8N6T0 577 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 CADM1Q9BY67 442 aaKnown RBP17.38■□□□□ 0.37
GABRB3-202ENST00000311550 RHOJQ9H4E5 214 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 UGT1A7Q9HAW7 530 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 UGT1A10Q9HAW8 530 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 UGT1A8Q9HAW9 530 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 KLQ9UEF7 1012 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 SLC27A5Q9Y2P5 690 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 VPS4BO75351 444 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 RABGGTBP53611 331 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 DEFA1P59665 94 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 DEFA3P59666 94 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 BFSP2Q13515 415 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 TEX44Q53QW1 395 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 STXBP5Q5T5C0 1151 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 RFWD3Q6PCD5 774 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 DRICH1Q6PGQ1 229 aaPredicted RBP17.38■□□□□ 0.37
GABRB3-202ENST00000311550 TMEM26Q6ZUK4 368 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 ARHGEF4Q9NR80 690 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 CNTNAP1P78357 1384 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 TM7SF2O76062 418 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 NECAB2Q7Z6G3 386 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 EID3Q8N140 333 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 SPPL2AQ8TCT8 520 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 C1orf50Q9BV19 199 aa17.38■□□□□ 0.37
GABRB3-202ENST00000311550 ZNF214Q9UL59 606 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms