RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 EIF2B4Q9UI10 523 aaKnown RBP18.98■□□□□ 0.63
UPK3B-201ENST00000257632 REXO2Q9Y3B8 237 aaKnown RBP18.98■□□□□ 0.63
UPK3B-201ENST00000257632 ALG6Q9Y672 507 aa18.98■□□□□ 0.63
UPK3B-201ENST00000257632 CEP250Q9BV73 2442 aa18.98■□□□□ 0.63
UPK3B-201ENST00000257632 PI4KAP42356 2102 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3DA0A087WVF3 549 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3IA0A087WXS9 549 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3EA0A087X179 549 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3KA0A087X1G2 549 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3FA6NER0 549 aaPredicted RBP18.97■□□□□ 0.63
UPK3B-201ENST00000257632 GOLGA6L3A6NEY3 463 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3LB9A6J9 549 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3HP0C7X1 549 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 GKP32189 559 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 RFTN1Q14699 578 aaPredicted RBP18.97■□□□□ 0.63
UPK3B-201ENST00000257632 MYLK3Q32MK0 819 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 PEAR1Q5VY43 1037 aaPredicted RBP18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3GQ6DHY5 549 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3CQ6IPX1 549 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 DAAM2Q86T65 1068 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 TBC1D3Q8IZP1 549 aaPredicted RBP18.97■□□□□ 0.63
UPK3B-201ENST00000257632 PCDH19Q8TAB3 1148 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 NSMCE1Q8WV22 266 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 DNASE2BQ8WZ79 361 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 BIRC7Q96CA5 298 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 LRIG1Q96JA1 1093 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 EXOC2Q96KP1 924 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 CALR3Q96L12 384 aaKnown RBP18.97■□□□□ 0.63
UPK3B-201ENST00000257632 MAK16Q9BXY0 300 aaKnown RBP18.97■□□□□ 0.63
UPK3B-201ENST00000257632 GOLPH3Q9H4A6 298 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 GRPEL1Q9HAV7 217 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 LHX3Q9UBR4 397 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 EVLQ9UI08 416 aaPredicted RBP18.97■□□□□ 0.63
UPK3B-201ENST00000257632 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.97■□□□□ 0.63
UPK3B-201ENST00000257632 SHROOM3Q8TF72 1996 aa18.97■□□□□ 0.63
UPK3B-201ENST00000257632 MED19A0JLT2 244 aaPredicted RBP18.96■□□□□ 0.63
UPK3B-201ENST00000257632 RCCD1A6NED2 376 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 PRR5-ARHGAP8B1AHC4 643 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 PSTPIP1O43586 416 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 PLRG1O43660 514 aaKnown RBP18.96■□□□□ 0.63
UPK3B-201ENST00000257632 MFSD11O43934 449 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 NEK3P51956 506 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 ARHGAP8P85298 464 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 PAFAH1B3Q15102 231 aaKnown RBP18.96■□□□□ 0.63
UPK3B-201ENST00000257632 TMCO4Q5TGY1 634 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 AGBL4Q5VU57 503 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 NCBP2-AS2Q69YL0 99 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 C11orf63Q6NUN7 778 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 FBXL19Q6PCT2 694 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 ERN2Q76MJ5 926 aaKnown RBP18.96■□□□□ 0.63
UPK3B-201ENST00000257632 ZCCHC9Q8N567 271 aaKnown RBP18.96■□□□□ 0.63
UPK3B-201ENST00000257632 TPCN2Q8NHX9 752 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 RNF25Q96BH1 459 aaPredicted RBP18.96■□□□□ 0.63
UPK3B-201ENST00000257632 FAF2Q96CS3 445 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 DESI2Q9BSY9 194 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 OSBPL1AQ9BXW6 950 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 KDM4CQ9H3R0 1056 aa18.96■□□□□ 0.63
UPK3B-201ENST00000257632 A0A1B0GTW7 788 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.95■□□□□ 0.62
UPK3B-201ENST00000257632 BTNL10A8MVZ5 291 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 RNF103O00237 685 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 UGT2B4P06133 528 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 ITGB7P26010 798 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 IRX4P78413 519 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 KIF5AQ12840 1032 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 ZNF235Q14590 738 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 PUM1Q14671 1186 aaKnown RBP eCLIP18.95■□□□□ 0.62
UPK3B-201ENST00000257632 LBRQ14739 615 aaKnown RBP18.95■□□□□ 0.62
UPK3B-201ENST00000257632 PIP5KL1Q5T9C9 394 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 SLC23A3Q6PIS1 610 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 BBS5Q8N3I7 341 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 FAM131CQ96AQ9 280 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 ZNF830Q96NB3 372 aaPredicted RBP18.95■□□□□ 0.62
UPK3B-201ENST00000257632 ZNF599Q96NL3 588 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 RNF157Q96PX1 679 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 EDEM2Q9BV94 578 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 HDAC8Q9BY41 377 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 LACRTQ9GZZ8 138 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 SEPT3Q9UH03 358 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 SALL4Q9UJQ4 1053 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 SLC6A14Q9UN76 642 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.95■□□□□ 0.62
UPK3B-201ENST00000257632 DUSP10Q9Y6W6 482 aa18.95■□□□□ 0.62
UPK3B-201ENST00000257632 BCAT2O15382 392 aaPredicted RBP18.94■□□□□ 0.62
UPK3B-201ENST00000257632 PJA2O43164 708 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 SERPINF2P08697 491 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 CD27P26842 260 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 RENBPP51606 427 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 IFI16Q16666 785 aaKnown RBP18.94■□□□□ 0.62
UPK3B-201ENST00000257632 RSPO4Q2I0M5 234 aaPredicted RBP18.94■□□□□ 0.62
UPK3B-201ENST00000257632 ZNF805Q5CZA5 627 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 GDPD4Q6W3E5 623 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 VSIG1Q86XK7 387 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 RFX6Q8HWS3 928 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 LRRC49Q8IUZ0 686 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 PQLC3Q8N755 202 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 TSEN2Q8NCE0 465 aaKnown RBP18.94■□□□□ 0.62
UPK3B-201ENST00000257632 CCDC112Q8NEF3 446 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 KLHL32Q96NJ5 620 aa18.94■□□□□ 0.62
UPK3B-201ENST00000257632 PREBQ9HCU5 417 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms