RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Afap1l2Q5DTU0 825 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Gbp4Q61107 620 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Nrg1Q6DR99 700 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Gm5414Q6IFZ8 552 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Colgalt2Q6NVG7 625 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Rxfp4Q7TQP4 414 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 TdrkhQ80VL1 560 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Smoc1Q8BLY1 463 aaKnown RBP15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 CenpuQ8C4M7 410 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Rbm12Q8R4X3 992 aaKnown RBP15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 AjubaQ91XC0 547 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Pih1d1Q9CQJ2 290 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Ly6kQ9CWP4 154 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 DtnaQ9D2N4 746 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Efcab9Q9DAM2 216 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Tm9sf1Q9DBU0 606 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 Krt7Q9DCV7 457 aa15.01□□□□□ -0.01
Nup88-202ENSMUST00000108530 LifP09056 203 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Gabrr2P56476 465 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 1700061G19RikQ08EE8 705 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Lrrc47Q505F5 581 aaKnown RBP15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Mtnr1aQ61184 353 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Gga2Q6P5E6 603 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Cdc14bQ6PFY9 485 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Olfr698Q7TRN4 311 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Arhgap12Q8C0D4 838 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Ano4Q8C5H1 955 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Ago1Q8CJG1 857 aaKnown RBP15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Pitrm1Q8K411 1036 aaKnown RBP15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Asz1Q8VD46 475 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Ndufb5Q9CQH3 189 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Kdelc1Q9JHP7 502 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Gm6370A0A0G2JGX9 315 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Gm21964A0A1W2P7S4 437 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Kdelc2G5E897 503 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Gm6309L7N481 315 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 ChrngP04760 519 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 CblP22682 913 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 GemP55041 295 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Hspa8P63017 646 aaKnown RBP15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Trmt10cQ3UFY8 414 aaKnown RBP15□□□□□ -0.01
Nup88-202ENSMUST00000108530 RilpQ5ND29 369 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Wee2Q66JT0 555 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Ubap1Q8BH48 502 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Cabs1Q8C633 391 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Nup85Q8R480 656 aaKnown RBP15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Chrna6Q9R0W9 494 aa15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Stau1Q9Z108 487 aaKnown RBP15□□□□□ -0.01
Nup88-202ENSMUST00000108530 Sp1O89090 784 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 MaptP10637 733 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Smpdl3bP58242 456 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 PrlrQ08501 608 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Samd11Q1RNF8 542 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 H2-Q2Q4KN81 360 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Arnt2Q61324 712 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Eif2b4Q61749 524 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 PtprrQ62132 656 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Paqr9Q6TCG2 375 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Casd1Q7TN73 797 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 TbcdQ8BYA0 1196 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Cacnb2Q8CC27 655 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Ddx18Q8K363 660 aaKnown RBP14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Gfm2Q8R2Q4 779 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 RhoqQ8R527 205 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Imp4Q8VHZ7 291 aaKnown RBP14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Q9CPS8 106 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Terb2Q9D494 218 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Ovca2Q9D7E3 225 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Clec1bQ9JL99 229 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Tex13c2A0A0G2JGA3 530 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 6720489N17RikA0A1Y7VJW0 127 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Tmem215A7E1Z1 235 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 2310061I04RikB8JJ69 315 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Cilp2D3Z7H8 1162 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Dnase1l3O55070 310 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Thumpd3P97770 505 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Caprin2Q05A80 1031 aaKnown RBP14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Eml1Q05BC3 814 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Fam120bQ6RI63 786 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Olfr213Q7TS32 327 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Frmd4aQ8BIE6 1020 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Zfp398Q8BV16 643 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Zdhhc12Q8VC90 267 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Marc1Q9CW42 340 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 CinpQ9D0V8 212 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Cldn19Q9ET38 224 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 TriobpQ99KW3 2014 aa14.99□□□□□ -0.01
Nup88-202ENSMUST00000108530 Ap3d1O54774 1199 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Prickle1Q3U5C7 832 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Enpp3Q6DYE8 874 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Msantd1Q8BIL2 278 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Slco6c1Q8C0X7 706 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Calcoco1Q8CGU1 691 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Dnm1lQ8K1M6 742 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Vmn1r18Q8R2C8 299 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Tcf25Q8R3L2 676 aaKnown RBP14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Olfr589Q8VGV8 317 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Nsmce3Q9CPR8 279 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Armc9Q9D2I5 817 aa14.98□□□□□ -0.01
Nup88-202ENSMUST00000108530 Cpxm2Q9D2L5 764 aa14.98□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms