Protein–RNA interactions for Protein: Q8R2C8

Vmn1r18, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r18Q8R2C8 Gm25239-201ENSMUST00000174915 86 ntBASIC38.67■■■■□ 3.78
Vmn1r18Q8R2C8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
Vmn1r18Q8R2C8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Vmn1r18Q8R2C8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Vmn1r18Q8R2C8 Gm15042-201ENSMUST00000120212 883 ntBASIC33.97■■■■□ 3.03
Vmn1r18Q8R2C8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Vmn1r18Q8R2C8 Gm24109-201ENSMUST00000175489 103 ntBASIC33.44■■■□□ 2.94
Vmn1r18Q8R2C8 Gm15045-201ENSMUST00000117359 883 ntBASIC33.28■■■□□ 2.92
Vmn1r18Q8R2C8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
Vmn1r18Q8R2C8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Vmn1r18Q8R2C8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Vmn1r18Q8R2C8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Vmn1r18Q8R2C8 Gm23366-201ENSMUST00000175022 89 ntBASIC32.3■■■□□ 2.76
Vmn1r18Q8R2C8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Vmn1r18Q8R2C8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Vmn1r18Q8R2C8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.89■■■□□ 2.7
Vmn1r18Q8R2C8 Psd-208ENSMUST00000224556 2034 ntBASIC31.67■■■□□ 2.66
Vmn1r18Q8R2C8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Vmn1r18Q8R2C8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Vmn1r18Q8R2C8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Vmn1r18Q8R2C8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Vmn1r18Q8R2C8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Vmn1r18Q8R2C8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Vmn1r18Q8R2C8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
Vmn1r18Q8R2C8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Vmn1r18Q8R2C8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Vmn1r18Q8R2C8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.16■■■□□ 2.58
Vmn1r18Q8R2C8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.16■■■□□ 2.58
Vmn1r18Q8R2C8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Vmn1r18Q8R2C8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.96■■■□□ 2.55
Vmn1r18Q8R2C8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.7■■■□□ 2.51
Vmn1r18Q8R2C8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Vmn1r18Q8R2C8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.66■■■□□ 2.5
Vmn1r18Q8R2C8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Vmn1r18Q8R2C8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Vmn1r18Q8R2C8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Vmn1r18Q8R2C8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Vmn1r18Q8R2C8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Vmn1r18Q8R2C8 Gm25238-201ENSMUST00000174914 89 ntBASIC30.46■■■□□ 2.47
Vmn1r18Q8R2C8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Vmn1r18Q8R2C8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.38■■■□□ 2.45
Vmn1r18Q8R2C8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Vmn1r18Q8R2C8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Vmn1r18Q8R2C8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.07■■■□□ 2.4
Vmn1r18Q8R2C8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Vmn1r18Q8R2C8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Vmn1r18Q8R2C8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Vmn1r18Q8R2C8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Vmn1r18Q8R2C8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.89■■■□□ 2.37
Vmn1r18Q8R2C8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
Vmn1r18Q8R2C8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.83■■■□□ 2.37
Vmn1r18Q8R2C8 Gm27325-201ENSMUST00000175467 74 ntBASIC29.81■■■□□ 2.36
Vmn1r18Q8R2C8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Vmn1r18Q8R2C8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Vmn1r18Q8R2C8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Vmn1r18Q8R2C8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Vmn1r18Q8R2C8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.53■■■□□ 2.32
Vmn1r18Q8R2C8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.52■■■□□ 2.32
Vmn1r18Q8R2C8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Vmn1r18Q8R2C8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Vmn1r18Q8R2C8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Vmn1r18Q8R2C8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.43■■■□□ 2.3
Vmn1r18Q8R2C8 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.42■■■□□ 2.3
Vmn1r18Q8R2C8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.38■■■□□ 2.29
Vmn1r18Q8R2C8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
Vmn1r18Q8R2C8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Vmn1r18Q8R2C8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Vmn1r18Q8R2C8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Vmn1r18Q8R2C8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Vmn1r18Q8R2C8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Vmn1r18Q8R2C8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Vmn1r18Q8R2C8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Vmn1r18Q8R2C8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Vmn1r18Q8R2C8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Vmn1r18Q8R2C8 Rab21-202ENSMUST00000218831 843 ntBASIC29.13■■■□□ 2.25
Vmn1r18Q8R2C8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.07■■■□□ 2.24
Vmn1r18Q8R2C8 Gm25262-201ENSMUST00000174934 133 ntBASIC29.04■■■□□ 2.24
Vmn1r18Q8R2C8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.03■■■□□ 2.24
Vmn1r18Q8R2C8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.02■■■□□ 2.24
Vmn1r18Q8R2C8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Vmn1r18Q8R2C8 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.01■■■□□ 2.23
Vmn1r18Q8R2C8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Vmn1r18Q8R2C8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Vmn1r18Q8R2C8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Vmn1r18Q8R2C8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Vmn1r18Q8R2C8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Vmn1r18Q8R2C8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.78■■■□□ 2.2
Vmn1r18Q8R2C8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Vmn1r18Q8R2C8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Vmn1r18Q8R2C8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Vmn1r18Q8R2C8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.7■■■□□ 2.18
Vmn1r18Q8R2C8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Vmn1r18Q8R2C8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Vmn1r18Q8R2C8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Vmn1r18Q8R2C8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Vmn1r18Q8R2C8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Vmn1r18Q8R2C8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.54■■■□□ 2.16
Vmn1r18Q8R2C8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Vmn1r18Q8R2C8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Vmn1r18Q8R2C8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 1071.5 ms