RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TRIM11Q96F44 468 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 PPP1R16AQ96I34 528 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 LRIG1Q96JA1 1093 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 CDC6Q99741 560 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 NCAPGQ9BPX3 1015 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 NOL6Q9H6R4 1146 aaKnown RBP10.72□□□□□ -0.69
CCDC9-203ENST00000596938 CATSPERBQ9H7T0 1116 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 ERVMER34-1Q9H9K5 563 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 MRPL47Q9HD33 250 aaKnown RBP10.72□□□□□ -0.69
CCDC9-203ENST00000596938 DYRK4Q9NR20 520 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 AASDHPPTQ9NRN7 309 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 HECAQ9UBI9 543 aaPredicted RBP10.72□□□□□ -0.69
CCDC9-203ENST00000596938 CAPN11Q9UMQ6 739 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 WASF2Q9Y6W5 498 aa10.72□□□□□ -0.69
CCDC9-203ENST00000596938 A0A1B0GTQ1 180 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 FAM221BA6H8Z2 402 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 PRAMEF26H0Y7S4 382 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 RNF103O00237 685 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 FGF10O15520 208 aaPredicted RBP10.71□□□□□ -0.69
CCDC9-203ENST00000596938 CREB3O43889 395 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 MAGEC1O60732 1142 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 RNF8O76064 485 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 POP4O95707 220 aaKnown RBP10.71□□□□□ -0.69
CCDC9-203ENST00000596938 GSRP00390 522 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 CCNHP51946 323 aaPredicted RBP10.71□□□□□ -0.69
CCDC9-203ENST00000596938 FOXC1Q12948 553 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 SERINC3Q13530 473 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 STAT4Q14765 748 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 MYLK3Q32MK0 819 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 PARP15Q460N3 678 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 SETMARQ53H47 684 aaPredicted RBP10.71□□□□□ -0.69
CCDC9-203ENST00000596938 LAYNQ6UX15 382 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 PSTKQ8IV42 348 aaKnown RBP10.71□□□□□ -0.69
CCDC9-203ENST00000596938 RHBDD1Q8TEB9 315 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 ELF4Q99607 663 aaPredicted RBP10.71□□□□□ -0.69
CCDC9-203ENST00000596938 GDF3Q9NR23 364 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 CNOT8Q9UFF9 292 aaKnown RBP10.71□□□□□ -0.69
CCDC9-203ENST00000596938 FCF1Q9Y324 198 aaKnown RBP10.71□□□□□ -0.69
CCDC9-203ENST00000596938 LUC7L2Q9Y383 392 aaKnown RBP10.71□□□□□ -0.69
CCDC9-203ENST00000596938 ACTL7AQ9Y615 435 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 SCINQ9Y6U3 715 aa10.71□□□□□ -0.69
CCDC9-203ENST00000596938 A0A1W2PQU0 124 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 RASA4BC9J798 803 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 ATMINO43313 823 aaPredicted RBP10.7□□□□□ -0.7
CCDC9-203ENST00000596938 RASA4O43374 803 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 BUB1O43683 1085 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 AP1G1O43747 822 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 PRPSAP2O60256 369 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 SERPING1P05155 500 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 ITGB7P26010 798 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 MIPP30301 263 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 MAT2AP31153 395 aaKnown RBP10.7□□□□□ -0.7
CCDC9-203ENST00000596938 GRK6P43250 576 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 RXRGP48443 463 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 HCAR3P49019 387 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 CCT8P50990 548 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 NEK3P51956 506 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 ZNF135P52742 658 aaPredicted RBP10.7□□□□□ -0.7
CCDC9-203ENST00000596938 NDST2P52849 883 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 NXPH1P58417 271 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 SNRPD1P62314 119 aaKnown RBP10.7□□□□□ -0.7
CCDC9-203ENST00000596938 ZNF284Q2VY69 593 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 ZNF805Q5CZA5 627 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 FBXL19Q6PCT2 694 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 RAB44Q7Z6P3 723 aaPredicted RBP10.7□□□□□ -0.7
CCDC9-203ENST00000596938 VPS36Q86VN1 386 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 ZSCAN30Q86W11 494 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 HORMAD1Q86X24 394 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 DNAAF5Q86Y56 855 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 OR2AP1Q8NGE2 309 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 BAHD1Q8TBE0 780 aaPredicted RBP10.7□□□□□ -0.7
CCDC9-203ENST00000596938 GRIN3AQ8TCU5 1115 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 CPLX3Q8WVH0 158 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 RAB7BQ96AH8 199 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 VOPP1Q96AW1 172 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 HMCESQ96FZ2 354 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 TRIM7Q9C029 511 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 LRRC19Q9H756 370 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 IFNKQ9P0W0 207 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 MFHAS1Q9Y4C4 1052 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 NEUROG3Q9Y4Z2 214 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 FADS3Q9Y5Q0 445 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 CACNA1EQ15878 2313 aa10.7□□□□□ -0.7
CCDC9-203ENST00000596938 PI4KAP42356 2102 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 ASPMQ8IZT6 3477 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 CEP295Q9C0D2 2601 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 SPEGQ15772 3267 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 YKT6O15498 198 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 TMCC1O94876 653 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 PCDH8O95206 1070 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 TPM3P06753 285 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 ADRB3P13945 408 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 HNRNPH3P31942 346 aaKnown RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 PCK1P35558 622 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 ARRB1P49407 418 aaPredicted RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 TPI1P60174 286 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 RPS21P63220 83 aaKnown RBP10.69□□□□□ -0.7
CCDC9-203ENST00000596938 SHBQ15464 509 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 CA9Q16790 459 aa10.69□□□□□ -0.7
CCDC9-203ENST00000596938 TMEM259Q4ZIN3 620 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms