RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CHKAP35790 457 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 GRK6P43250 576 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 PTDSS1P48651 473 aaKnown RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 DGKEP52429 567 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 RPS7P62081 194 aaKnown RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 FAM189BP81408 668 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 MRPS6P82932 125 aaKnown RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 UBE3AQ05086 875 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 GALNT1Q10472 559 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 BLMHQ13867 455 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 SMC1AQ14683 1233 aaKnown RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 ELF2Q15723 593 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 LETM2Q2VYF4 491 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 MARCH8Q5T0T0 291 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 TMEM108Q6UXF1 575 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 TMEM173Q86WV6 379 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 VPS52Q8N1B4 723 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 GLIS1Q8NBF1 620 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 CCDC150Q8NCX0 1101 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 CXorf38Q8TB03 319 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 SLC22A17Q8WUG5 538 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 MUL1Q969V5 352 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 C20orf173Q96LM9 149 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 BBC3Q96PG8 261 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 PTDSS2Q9BVG9 487 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 KLC2Q9H0B6 622 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 ZNF703Q9H7S9 590 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 TMEM74BQ9NUR3 256 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 SPG21Q9NZD8 308 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 RGL1Q9NZL6 768 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 TESMINQ9Y4I5 508 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 CDY1Q9Y6F8 540 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 GREB1Q4ZG55 1949 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 MTCL1Q9Y4B5 1905 aaKnown RBP5.89□□□□□ -1.47
SF3B3-214ENST00000572365 NOTCH4Q99466 2003 aa5.89□□□□□ -1.47
SF3B3-214ENST00000572365 DENND3A2RUS2 1198 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 AQP7P3A6NL99 342 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 K7ESM1 405 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 TAF4O00268 1085 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 PODXLO00592 558 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 DHX16O60231 1041 aaKnown RBP5.88□□□□□ -1.47
SF3B3-214ENST00000572365 RFPL2O75678 378 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 KCNK5O95279 499 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 HSPD1P10809 573 aaKnown RBP5.88□□□□□ -1.47
SF3B3-214ENST00000572365 PDHBP11177 359 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 TPH1P17752 444 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 KRT17Q04695 432 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 MYO1EQ12965 1108 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 PPFIA1Q13136 1202 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 FZD5Q13467 585 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 RAPGEF1Q13905 1077 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 WTAPQ15007 396 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 CDC37Q16543 378 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-214ENST00000572365 CYP2A13Q16696 494 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 ZNF750Q32MQ0 723 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 BEAN1Q3B7T3 259 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 ZACNQ401N2 412 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 CCDC38Q502W7 563 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 SP5Q6BEB4 398 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-214ENST00000572365 ARMC6Q6NXE6 501 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 ZNF585AQ6P3V2 769 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 FBXO38Q6PIJ6 1188 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 KIAA0408Q6ZU52 694 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 MICALCLQ6ZW33 695 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 TRMT1LQ7Z2T5 733 aaKnown RBP5.88□□□□□ -1.47
SF3B3-214ENST00000572365 GPR149Q86SP6 731 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 KRT73Q86Y46 540 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 LURAP1LQ8IV03 231 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 ADGRG5Q8IZF4 528 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 CACNA2D3Q8IZS8 1091 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 ABCA7Q8IZY2 2146 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 ZBTB44Q8NCP5 570 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 MYRIPQ8NFW9 859 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 BPIFB1Q8TDL5 484 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 MAP4K1Q92918 833 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 FUBP1Q96AE4 644 aaKnown RBP5.88□□□□□ -1.47
SF3B3-214ENST00000572365 NACC2Q96BF6 587 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 CASD1Q96PB1 797 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 IWS1Q96ST2 819 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 OSBPL9Q96SU4 736 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 NELL2Q99435 816 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 GPR20Q99678 358 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 ZNF768Q9H5H4 540 aaKnown RBP5.88□□□□□ -1.47
SF3B3-214ENST00000572365 TMEM8AQ9HCN3 771 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 AKIP1Q9NQ31 210 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 RAB23Q9ULC3 237 aa5.88□□□□□ -1.47
SF3B3-214ENST00000572365 ASCC3Q8N3C0 2202 aaKnown RBP5.88□□□□□ -1.47
SF3B3-214ENST00000572365 CACNA1EQ15878 2313 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 NPC1O15118 1278 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 NCR1O76036 304 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 TPM2P07951 284 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 INSRRP14616 1297 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 IDEP14735 1019 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 EGR1P18146 543 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 KLRC2P26717 231 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 NPTX2P47972 431 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 MTAPQ13126 283 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 PGM5Q15124 567 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 PFKFB4Q16877 469 aa5.87□□□□□ -1.47
SF3B3-214ENST00000572365 QRICH1Q2TAL8 776 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms