RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MRPS35P82673 323 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 FLOT2Q14254 428 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 FSCBQ5H9T9 825 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 CLEC6AQ6EIG7 209 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 ACAD11Q709F0 780 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 C14orf80Q86SX3 495 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 TOP6BLQ8N6T0 577 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 CASP10Q92851 521 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 PPWD1Q96BP3 646 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 NAT9Q9BTE0 207 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 C11orf84Q9BUA3 381 aaPredicted RBP13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 TRIM8Q9BZR9 551 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 CDH19Q9H159 772 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 POMPQ9Y244 141 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 DERAQ9Y315 318 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 PARP14Q460N5 1801 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 SUPT7LO94864 414 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 CCR1P32246 355 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 LHX1P48742 406 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 ACTR3P61158 418 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 RALGDSQ12967 914 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 CDC16Q13042 620 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 FAM110CQ1W6H9 321 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 AGMOQ6ZNB7 445 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 GK5Q6ZS86 529 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 CFAP52Q8N1V2 620 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 OR10T2Q8NGX3 314 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 CNBD2Q96M20 576 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 TBL1YQ9BQ87 522 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 SLC39A3Q9BRY0 314 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 GBA3Q9H227 469 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 SARS2Q9NP81 518 aaKnown RBP13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 PADI3Q9ULW8 664 aa13.86□□□□□ -0.19
PRPF40B-209ENST00000548825 ITGAXP20702 1163 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 SLC5A3P53794 718 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 TSPY1Q01534 308 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 NRF1Q16656 503 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 IFNEQ86WN2 208 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 PPHLN1Q8NEY8 458 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 FAXDC2Q96IV6 333 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 TEKT5Q96M29 485 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 SEPT5Q99719 369 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 ARHGAP39Q9C0H5 1083 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 PIF1Q9H611 641 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 TRMT13Q9NUP7 481 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 ADAMTS6Q9UKP5 1117 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 ACTL7AQ9Y615 435 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 A0A1W2PQH9 124 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 TIMM44O43615 452 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 STAU1O95793 577 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 MLNP12872 115 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 WARSP23381 471 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 PIK3R1P27986 724 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 SLC1A2P43004 574 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 PSMD5Q16401 504 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 ANO4Q32M45 955 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 SFT2D3Q587I9 215 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 PIM3Q86V86 326 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 TLE6Q9H808 572 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 CNGB3Q9NQW8 809 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 DSEQ9UL01 958 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 J3KR12 359 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 CCDC166P0CW27 439 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 ACADSP16219 412 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 MRPS6P82932 125 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 SPRYD7Q5W111 196 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 NET1Q7Z628 596 aaPredicted RBP13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 TTC9BQ8N6N2 239 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 ECSITQ9BQ95 431 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 IL22Q9GZX6 179 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 ALG9Q9H6U8 611 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 SP110Q9HB58 689 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 GPAMQ9HCL2 828 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 IGSF9Q9P2J2 1179 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 IPO11Q9UI26 975 aaKnown RBP13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 CDYLQ9Y232 598 aa13.85□□□□□ -0.19
PRPF40B-209ENST00000548825 HLA-DQB2P05538 268 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 PAPOLAP51003 745 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 DSC2Q02487 901 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 DLG1Q12959 904 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 CYTH1Q15438 398 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 PPP1R3AQ16821 1122 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 SCIMPQ6UWF3 145 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 HDAC11Q96DB2 347 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 LRGUKQ96M69 825 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 DMAP1Q9NPF5 467 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 SLC38A7Q9NVC3 462 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 GNEQ9Y223 722 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 ODC1P11926 461 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 KCNE1P15382 129 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 GABRB3P28472 473 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 RPL14P50914 215 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 PPIDQ08752 370 aaKnown RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 NSUN2Q08J23 767 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 MED21Q13503 144 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 CYLC2Q14093 348 aaPredicted RBP13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 KIF19Q2TAC6 998 aa13.84□□□□□ -0.19
PRPF40B-209ENST00000548825 CCDC153Q494R4 210 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms