RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 GRIK2Q13002 908 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SEMA3BQ13214 749 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TDRD12Q587J7 1177 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CARD16Q5EG05 197 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ERMARDQ5T6L9 678 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 N4BP2L1Q5TBK1 243 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 IL27RAQ6UWB1 636 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PRPF39Q86UA1 669 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PCDH20Q8N6Y1 951 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RTL3Q8N8U3 475 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CHST14Q8NCH0 376 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FNIP1Q8TF40 1166 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ISG20Q96AZ6 181 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZNF653Q96CK0 615 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ORAI3Q9BRQ5 295 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 XPO4Q9C0E2 1151 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SLC32A1Q9H598 525 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TM9SF3Q9HD45 589 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DONSONQ9NYP3 566 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MYO1AQ9UBC5 1043 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PCSK1NQ9UHG2 260 aa9.93□□□□□ -0.82
TNFRSF1A-214ENST00000543048 A0A1B0GVT2 93 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZSCAN5CA6NGD5 496 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 EIF3CLB5ME19 914 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 C10orf142B7Z368 130 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FGF10O15520 208 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GJB3O75712 270 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CD160O95971 181 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CTSLP07711 333 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ADRB1P08588 477 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CD59P13987 128 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MIPP30301 263 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CASP14P31944 242 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NUDT1P36639 197 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 METAP1P53582 386 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ADPRHP54922 357 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 YBEYP58557 167 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RACK1P63244 317 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 BNC1Q01954 994 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ACAP1Q15027 740 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HLA-BQ31612 363 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 POM121L1PQ3SYA9 428 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SWT1Q5T5J6 900 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PSAPL1Q6NUJ1 521 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 C22orf39Q6P5X5 142 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DPY19L3Q6ZPD9 716 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PIP4P1Q86T03 277 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PSTKQ8IV42 348 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ARFGAP1Q8N6T3 406 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 OR2I1PQ8NGU4 316 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FAM131CQ96AQ9 280 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SKA1Q96BD8 255 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 EIF3CQ99613 913 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HEPHQ9BQS7 1158 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TNKS2Q9H2K2 1166 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DHX35Q9H5Z1 703 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GAREM1Q9H706 876 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 EBF2Q9HAK2 575 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DYRK4Q9NR20 520 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 IL36AQ9UHA7 158 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TSR3Q9UJK0 312 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NEU3Q9UQ49 428 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ANKRD6Q9Y2G4 727 aa9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TPRP12270 2363 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ARID1BQ8NFD5 2236 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LRRK1Q38SD2 2015 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 A0A087X0T9 212 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RASA4BC9J798 803 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 EEF2KO00418 725 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 KPNA3O00505 521 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GIPC1O14908 333 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DAPK3O43293 454 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RASA4O43374 803 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PLRG1O43660 514 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 BUB1O43683 1085 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PRPSAP2O60256 369 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LEFTY1O75610 366 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 POP4O95707 220 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CER1O95813 267 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GYPCP04921 128 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FAM228BP0C875 321 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZNF883P0CG24 379 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HNRNPH3P31942 346 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PCK1P35558 622 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GRIA4P48058 902 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HCAR3P49019 387 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZNF135P52742 658 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SNRPD1P62314 119 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZNF252P-AS1Q0IIN9 211 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HNRNPDQ14103 355 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 KIF19Q2TAC6 998 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PARP15Q460N3 678 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 BOLA3Q53S33 107 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 INO80DQ53TQ3 878 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CCDC122Q5T0U0 273 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 AGBL4Q5VU57 503 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SPECC1LQ69YQ0 1117 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NEK5Q6P3R8 708 aa9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ALKBH5Q6P6C2 394 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ADAT2Q7Z6V5 191 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms