RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 PCSK1NQ9UHG2 260 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 FCF1Q9Y324 198 aaKnown RBP17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 ACTL7AQ9Y615 435 aa17.52■□□□□ 0.4
SFSWAP-205ENST00000537164 CHD8Q9HCK8 2581 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3DA0A087WVF3 549 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3IA0A087WXS9 549 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3EA0A087X179 549 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3KA0A087X1G2 549 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 A0A1B0GVT2 93 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3FA6NER0 549 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3LB9A6J9 549 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 RASA4BC9J798 803 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 KPNA3O00505 521 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 VILLO15195 856 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 RASA4O43374 803 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 LEFTY1O75610 366 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 CER1O95813 267 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 GSRP00390 522 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3HP0C7X1 549 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 NOVA1P51513 510 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 CCNHP51946 323 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 PPP2CBP62714 309 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 PPP2CAP67775 309 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 ARSIQ5FYB1 569 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3GQ6DHY5 549 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3CQ6IPX1 549 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 PSAPL1Q6NUJ1 521 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 TBC1D3Q8IZP1 549 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 HMCESQ96FZ2 354 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 PPP1R16AQ96I34 528 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 KCTD15Q96SI1 283 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 KLC2Q9H0B6 622 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 DHX35Q9H5Z1 703 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 GPATCH2LQ9NWQ4 482 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 ANKRD6Q9Y2G4 727 aa17.51■□□□□ 0.39
SFSWAP-205ENST00000537164 SSU72P8A0A1W2PR75 194 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 EEF2KO00418 725 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 ITGB7P26010 798 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 CTSKP43235 329 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 DPYSL2Q16555 572 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 SLC18A3Q16572 532 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 KIF19Q2TAC6 998 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 HLA-BQ31612 363 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 POM121L1PQ3SYA9 428 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 BOLA3Q53S33 107 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 CCDC122Q5T0U0 273 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 N4BP2L1Q5TBK1 243 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 AFMIDQ63HM1 303 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 RFX8Q6ZV50 586 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 ERN2Q76MJ5 926 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 OR2AP1Q8NGE2 309 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 SLC32A1Q9H598 525 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 GAREM1Q9H706 876 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 HECAQ9UBI9 543 aaPredicted RBP17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 DMTF1Q9Y222 760 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 PCDHGB2Q9Y5G2 931 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 SPEGQ15772 3267 aa17.5■□□□□ 0.39
SFSWAP-205ENST00000537164 A0A1W2PR77 199 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 GIPC1O14908 333 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 IL1R2P27930 398 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 CD38P28907 300 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 EIF4A3P38919 411 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 SNRPD1P62314 119 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 HNRNPDQ14103 355 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 ZNF423Q2M1K9 1284 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 KCNT1Q5JUK3 1230 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 SARM1Q6SZW1 724 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 PRPF39Q86UA1 669 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 RNF214Q8ND24 703 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 DEFB124Q8NES8 71 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 GRIN3AQ8TCU5 1115 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 ARHGEF26Q96DR7 871 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 SLC6A18Q96N87 628 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 NUP85Q9BW27 656 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 TM6SF2Q9BZW4 377 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 PDFQ9HBH1 243 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 DYRK4Q9NR20 520 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 CWC15Q9P013 229 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 IP6K2Q9UHH9 426 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 MFHAS1Q9Y4C4 1052 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 SNX11Q9Y5W9 270 aa17.49■□□□□ 0.39
SFSWAP-205ENST00000537164 TRPM6Q9BX84 2022 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 BUB1O43683 1085 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 AP1G1O43747 822 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 DFNA5O60443 496 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 RNGTTO60942 597 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 TMCC1O94876 653 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 POP4O95707 220 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 WNT1P04628 370 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 TCF4P15884 667 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 ERCC2P18074 760 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 PMLP29590 882 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 DNA2P51530 1060 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 NEK3P51956 506 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 DPYSQ14117 519 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 NAPEPLDQ6IQ20 393 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 IQCHQ86VS3 1027 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 TEKT4Q8WW24 435 aa17.48■□□□□ 0.39
SFSWAP-205ENST00000537164 SKA1Q96BD8 255 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms