RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 USP29Q9HBJ7 922 aa21.5■■□□□ 1.03
CHKA-206ENST00000531341 MPP6Q9NZW5 540 aa21.5■■□□□ 1.03
CHKA-206ENST00000531341 PNMA8BQ9ULN7 279 aaPredicted RBP21.5■■□□□ 1.03
CHKA-206ENST00000531341 FADS3Q9Y5Q0 445 aa21.5■■□□□ 1.03
CHKA-206ENST00000531341 ACTL7AQ9Y615 435 aa21.5■■□□□ 1.03
CHKA-206ENST00000531341 EME2A4GXA9 379 aaPredicted RBP21.49■■□□□ 1.03
CHKA-206ENST00000531341 NME1P15531 152 aaKnown RBP21.49■■□□□ 1.03
CHKA-206ENST00000531341 RBMS1P29558 406 aaKnown RBP21.49■■□□□ 1.03
CHKA-206ENST00000531341 STIM1Q13586 685 aa21.49■■□□□ 1.03
CHKA-206ENST00000531341 TFAP2DQ7Z6R9 452 aa21.49■■□□□ 1.03
CHKA-206ENST00000531341 DCP2Q8IU60 420 aaKnown RBP21.49■■□□□ 1.03
CHKA-206ENST00000531341 LMX1AQ8TE12 382 aa21.49■■□□□ 1.03
CHKA-206ENST00000531341 NELFBQ8WX92 580 aa21.49■■□□□ 1.03
CHKA-206ENST00000531341 KLF6Q99612 283 aaPredicted RBP21.49■■□□□ 1.03
CHKA-206ENST00000531341 TCEAL2Q9H3H9 227 aaPredicted RBP21.49■■□□□ 1.03
CHKA-206ENST00000531341 ARHGEF38Q9NXL2 777 aa21.49■■□□□ 1.03
CHKA-206ENST00000531341 HECTD1Q9ULT8 2610 aa21.49■■□□□ 1.03
CHKA-206ENST00000531341 COL6A6A6NMZ7 2263 aa21.49■■□□□ 1.03
CHKA-206ENST00000531341 DRGXA6NNA5 263 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 CDRT15L2A8MXV6 281 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 AQP9O43315 295 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 ADRB3P13945 408 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 USP8P40818 1118 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 STX17P56962 302 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 RPS21P63220 83 aaKnown RBP21.48■■□□□ 1.03
CHKA-206ENST00000531341 CCDC15Q0P6D6 951 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 EIF2B5Q13144 721 aaKnown RBP21.48■■□□□ 1.03
CHKA-206ENST00000531341 PDE1CQ14123 709 aaPredicted RBP21.48■■□□□ 1.03
CHKA-206ENST00000531341 ARHGAP44Q17R89 818 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 C11orf57Q6ZUT1 292 aaPredicted RBP21.48■■□□□ 1.03
CHKA-206ENST00000531341 DCAF4L2Q8NA75 395 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 C1orf131Q8NDD1 294 aaKnown RBP21.48■■□□□ 1.03
CHKA-206ENST00000531341 MED8Q96G25 268 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 CRACR2AQ9BSW2 395 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 CLMPQ9H6B4 373 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 CTNND2Q9UQB3 1225 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.48■■□□□ 1.03
CHKA-206ENST00000531341 CSNK1G3Q9Y6M4 447 aa21.48■■□□□ 1.03
CHKA-206ENST00000531341 EFSO43281 561 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 DAB1O75553 588 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 JUNDP17535 347 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 SLC9A1P19634 815 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 L1CAMP32004 1257 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 NOS2P35228 1153 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 CLCN6P51797 869 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 NEK3P51956 506 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 PDX1P52945 283 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 MARSP56192 900 aaKnown RBP21.47■■□□□ 1.03
CHKA-206ENST00000531341 SLC6A3Q01959 620 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 CLN3Q13286 438 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 PTPN20Q4JDL3 420 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 PARS2Q7L3T8 475 aaKnown RBP21.47■■□□□ 1.03
CHKA-206ENST00000531341 PARGQ86W56 976 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 RBFAQ8N0V3 343 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 FAM174AQ8TBP5 190 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 FEM1CQ96JP0 617 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 NPY6RQ99463 290 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 WDCPQ9H6R7 721 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 GGT7Q9UJ14 662 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 SALL4Q9UJQ4 1053 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 PCDHGA8Q9Y5G5 932 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 ATP6V1DQ9Y5K8 247 aa21.47■■□□□ 1.03
CHKA-206ENST00000531341 IGLON5A6NGN9 336 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 MUSKO15146 869 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 SLC28A2O43868 658 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 GCATO75600 419 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 ZMPSTE24O75844 475 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 GKP32189 559 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 RABIFP47224 123 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 CXCR3P49682 368 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 C1orf61Q13536 156 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 KIAA1161Q6NSJ0 714 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 RBM44Q6ZP01 1051 aaKnown RBP21.46■■□□□ 1.03
CHKA-206ENST00000531341 SETD3Q86TU7 594 aaPredicted RBP21.46■■□□□ 1.03
CHKA-206ENST00000531341 VOPP1Q96AW1 172 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 PPP1R16AQ96I34 528 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 SPON2Q9BUD6 331 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 SRRTQ9BXP5 876 aaKnown RBP21.46■■□□□ 1.03
CHKA-206ENST00000531341 PLCB1Q9NQ66 1216 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 EVA1BQ9NVM1 165 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 IPO11Q9UI26 975 aaKnown RBP21.46■■□□□ 1.03
CHKA-206ENST00000531341 AJAP1Q9UKB5 411 aaPredicted RBP21.46■■□□□ 1.03
CHKA-206ENST00000531341 PCDHGC3Q9UN70 934 aa21.46■■□□□ 1.03
CHKA-206ENST00000531341 FAM170AA1A519 330 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 TNFSF15O95150 251 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 CD160O95971 181 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 ITGB7P26010 798 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 ABL2P42684 1182 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 DNA2P51530 1060 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 RNASE9P60153 205 aaKnown RBP21.45■■□□□ 1.02
CHKA-206ENST00000531341 PFN3P60673 137 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 ARF5P84085 180 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 KCNC4Q03721 635 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 NR0B2Q15466 257 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 CCDC81Q6ZN84 652 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 SLC26A9Q7LBE3 791 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 SLC35F3Q8IY50 421 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 EXD3Q8N9H8 876 aa21.45■■□□□ 1.02
CHKA-206ENST00000531341 LENG8Q96PV6 779 aaPredicted RBP21.45■■□□□ 1.02
CHKA-206ENST00000531341 BOCQ9BWV1 1114 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms