RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MTTPP55157 894 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 UBXN2AP68543 259 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 HOXA4Q00056 320 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 TUBB2AQ13885 445 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 NONOQ15233 471 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZIK1Q3SY52 487 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 CMPK2Q5EBM0 449 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZNF362Q5T0B9 420 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 C10orf76Q5T2E6 689 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 C10orf62Q5T681 223 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 TMEM53Q6P2H8 277 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 RUFY3Q7L099 469 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 SFTPA1Q8IWL2 248 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 C17orf53Q8N3J3 647 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 CCDC33Q8N5R6 958 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 TRIML2Q8N7C3 387 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 LINC00469Q8N7U9 141 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 SCAIQ8N9R8 606 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZNF75CPQ92670 426 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 CASP10Q92851 521 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 TNIP3Q96KP6 325 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 JAKMIP1Q96N16 626 aaKnown RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 BBC3Q96PG8 261 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 FYTTD1Q96QD9 318 aaKnown RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 PLEKHF1Q96S99 279 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 TUBB2BQ9BVA1 445 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 SPZ1Q9BXG8 430 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 SEMA4CQ9C0C4 833 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 FAM192AQ9GZU8 254 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 IL17RBQ9NRM6 502 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 IL1RAPL1Q9NZN1 696 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 SH3BP4Q9P0V3 963 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 WDR35Q9P2L0 1181 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 DNAJB11Q9UBS4 358 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 STEAP1Q9UHE8 339 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 POLG2Q9UHN1 485 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 CAPN11Q9UMQ6 739 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 DRG1Q9Y295 367 aaKnown RBP4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 C15orf41Q9Y2V0 281 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 SNX14Q9Y5W7 946 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 RTL1A6NKG5 1358 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 CPDO75976 1380 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 CD163L1Q9NR16 1453 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 ADGRB2O60241 1585 aa4.87□□□□□ -1.63
HMGB3P13-201ENST00000511263 FRMD3A2A2Y4 597 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 BECN2A8MW95 431 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 HNRNPCL2B2RXH8 293 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 H7C1Q1 480 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 CES2O00748 559 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 CCNT2O60583 730 aaKnown RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 USO1O60763 962 aaKnown RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 HNRNPCL1O60812 293 aaKnown RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 SKAP2O75563 359 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 RPN1P04843 607 aaKnown RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 PRKCGP05129 697 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 ELFN1P0C7U0 828 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 CCDC192P0DO97 292 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 MYL4P12829 197 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 RRM1P23921 792 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 HOXC9P31274 260 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 PRKAR2BP31323 418 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 GKP32189 559 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 CSTF2P33240 577 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 KRT9P35527 623 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 MRPS21P82921 87 aaKnown RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 ACTN3Q08043 901 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 TRAP1Q12931 704 aaKnown RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 STK3Q13188 491 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 RIPK1Q13546 671 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 ITGA7Q13683 1181 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 DPYSQ14117 519 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 SPCS2Q15005 226 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 NPY5RQ15761 445 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 BCL2A1Q16548 175 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 LONRF1Q17RB8 773 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 C15orf59Q2T9L4 293 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 SLC9A4Q6AI14 798 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 TWF2Q6IBS0 349 aaKnown RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZSCAN25Q6NSZ9 544 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 NEPROQ6NW34 567 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 KLC3Q6P597 504 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 CYB5D1Q6P9G0 228 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZDHHC24Q6UX98 284 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 TRIM72Q6ZMU5 477 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 SNX32Q86XE0 403 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 TCP11L2Q8N4U5 519 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 SPERTQ8NA61 448 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 LILRB1Q8NHL6 650 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 TMEM171Q8WVE6 324 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 IRGQQ8WZA9 623 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 ZDHHC12Q96GR4 267 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 GDAP1L1Q96MZ0 367 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 HIST1H2AAQ96QV6 131 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 APOL5Q9BWW9 433 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 MAGEB5Q9BZ81 275 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 PUS3Q9BZE2 481 aaKnown RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 R3HDMLQ9H3Y0 253 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 DCTPP1Q9H773 170 aa4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 ADARB2Q9NS39 739 aaKnown RBP4.86□□□□□ -1.63
HMGB3P13-201ENST00000511263 TCP11L1Q9NUJ3 509 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms