RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 LINS1Q8NG48 757 aa4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 PPP1R10Q96QC0 940 aaKnown RBP4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 GFM1Q96RP9 751 aaKnown RBP4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 TM6SF1Q9BZW5 370 aa4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 LHPPQ9H008 270 aa4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 CDT1Q9H211 546 aa4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 CXorf56Q9H5V9 222 aa4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 GRHL1Q9NZI5 618 aa4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 KIF17Q9P2E2 1029 aa4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 HDAC6Q9UBN7 1215 aa4.94□□□□□ -1.62
UBE2D3-218ENST00000505009 TRIP12Q14669 1992 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 HBP1O60381 514 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 GJC1P36383 396 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 DPP6P42658 865 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 PTPN9P43378 593 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 MVDP53602 400 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 TRAF3Q13114 568 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 SHBQ15464 509 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 ADCK5Q3MIX3 580 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 C8orf82Q6P1X6 216 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 PRSS57Q6UWY2 283 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 NLKQ9UBE8 527 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 SUFUQ9UMX1 484 aa4.93□□□□□ -1.62
UBE2D3-218ENST00000505009 A0A096LPK6 155 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 OR6C68A6NDL8 312 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 CBX6O95503 412 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 PPP1R3DO95685 299 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 TK1P04183 234 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 ZNF12P17014 697 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 CD72P21854 359 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 ADD2P35612 726 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 CHKAP35790 457 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 MTNR1AP48039 350 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 CLCN5P51795 746 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 ACTR2P61160 394 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 ARHGAP8P85298 464 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 IL13RA2Q14627 380 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 TDRD12Q587J7 1177 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 MON1BQ7L1V2 547 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 PATL1Q86TB9 770 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 CLIP4Q8N3C7 705 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 TEX45Q8NA69 505 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 RILPL2Q969X0 211 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 SH3KBP1Q96B97 665 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 CTDSP1Q9GZU7 261 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 ZNF112Q9UJU3 913 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 DERAQ9Y315 318 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 COMMD10Q9Y6G5 202 aa4.92□□□□□ -1.62
UBE2D3-218ENST00000505009 NOTCH4Q99466 2003 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 SOX30O94993 753 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 NAGAP17050 411 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 GRK6P43250 576 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 NUDT6P53370 316 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 RRP1P56182 461 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 RHBDL3P58872 404 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 BYSLQ13895 437 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 MYBPC2Q14324 1141 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 IZUMO4Q1ZYL8 232 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 CTXN3Q4LDR2 81 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 SH2D4BQ5SQS7 431 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 FAM83BQ5T0W9 1011 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 ANKRD45Q5TZF3 282 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 ARMC9Q7Z3E5 817 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 FJX1Q86VR8 437 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 TMEM57Q8N5G2 664 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 ANKRD44Q8N8A2 993 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 OR14A16Q8NHC5 309 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 GPT2Q8TD30 523 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 TMED6Q8WW62 240 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 ATOH1Q92858 354 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 C6orf106Q9H6K1 298 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 CHODLQ9H9P2 273 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 PCDHGB1Q9Y5G3 927 aa4.91□□□□□ -1.62
UBE2D3-218ENST00000505009 CKAP5Q14008 2032 aa4.9□□□□□ -1.62
UBE2D3-218ENST00000505009 ZBTB11O95625 1053 aaPredicted RBP4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 KRTAP10-6P60371 365 aaPredicted RBP4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 BNC1Q01954 994 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 KIF5AQ12840 1032 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 POSTNQ15063 836 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 HLFQ16534 295 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 FBXO43Q4G163 708 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 DCAF6Q58WW2 860 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 EFHC1Q5JVL4 640 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 CBWD5Q5RIA9 395 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 DENND1BQ6P3S1 775 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 NR2C2APQ86WQ0 139 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 RBFAQ8N0V3 343 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 MYCT1Q8N699 235 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 ZMIZ2Q8NF64 920 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 SPPL3Q8TCT6 385 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 FAM216AQ8WUB2 273 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 TMEM18Q96B42 140 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 RBM17Q96I25 401 aaKnown RBP4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 FAM167BQ9BTA0 163 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 NPLQ9BXD5 320 aaPredicted RBP4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 NPFFR1Q9GZQ6 430 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 NOD2Q9HC29 1040 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 RASSF1Q9NS23 344 aa4.9□□□□□ -1.63
UBE2D3-218ENST00000505009 CD207Q9UJ71 328 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms