RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 BRD8Q9H0E9 1235 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 PRSS16Q9NQE7 514 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 POLR3BQ9NW08 1133 aaPredicted RBP15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 UBA2Q9UBT2 640 aaPredicted RBP15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 PLXND1Q9Y4D7 1925 aa15.21■□□□□ 0.02
CDC42SE1-203ENST00000470278 J3KR12 359 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 K7ERQ8 282 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 SIN3BO75182 1162 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 TMCC1O94876 653 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 TJP3O95049 919 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 PEX11BO96011 259 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 GSRP00390 522 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 NRLP54845 237 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZBTB16Q05516 673 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 ADCY2Q08462 1091 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 SLC10A2Q12908 348 aaPredicted RBP15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 KAZNQ674X7 775 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 TIGD7Q6NT04 549 aaPredicted RBP15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 Q6ZVU0 165 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 NETO2Q8NC67 525 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 MDGA1Q8NFP4 955 aa15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 RSPH9Q9H1X1 276 aaPredicted RBP15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 FCF1Q9Y324 198 aaKnown RBP15.2■□□□□ 0.02
CDC42SE1-203ENST00000470278 SHROOM3Q8TF72 1996 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 PPP1R12AO14974 1030 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 VAV1P15498 845 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 GABRG2P18507 467 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 NDUFV2P19404 249 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 CCNCP24863 283 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 DYNLT1P63172 113 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 PPIDQ08752 370 aaKnown RBP15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 KLF1Q13351 362 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 PDK1Q15118 436 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 ACCSLQ4AC99 568 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 ANO7Q6IWH7 933 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 OR2A12Q8NGT7 310 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 MAML1Q92585 1016 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 P3H4Q92791 437 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 MRGPRX1Q96LB2 322 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 PSKH2Q96QS6 385 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 HERPUD2Q9BSE4 406 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 MKRN2Q9H000 416 aaKnown RBP15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 NCDNQ9UBB6 729 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 HEY1Q9Y5J3 304 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 ACTL7AQ9Y615 435 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZFHX4Q86UP3 3567 aa15.19■□□□□ 0.02
CDC42SE1-203ENST00000470278 MCF2LO15068 1137 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 MATN3O15232 486 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZZEF1O43149 2961 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZBTB24O43167 697 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 MAP3K6O95382 1288 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 PECAM1P16284 738 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 HSPA9P38646 679 aaKnown RBP15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 DNA2P51530 1060 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 SNRPD1P62314 119 aaKnown RBP15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 SRSF5Q13243 272 aaKnown RBP15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZNF211Q13398 564 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 HNRNPDQ14103 355 aaKnown RBP15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZNF569Q5MCW4 686 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 SEL1L2Q5TEA6 688 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 ZNF776Q68DI1 518 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 AADACL2Q6P093 401 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 DSG4Q86SJ6 1040 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 WDR5BQ86VZ2 330 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 LONP2Q86WA8 852 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 SLC35F6Q8N357 371 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 TEX26Q8N6G2 289 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 OR2AP1Q8NGE2 309 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 HMGB4Q8WW32 186 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 OR8D1Q8WZ84 308 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 GDAP1L1Q96MZ0 367 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 FAM129BQ96TA1 746 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 HEMGNQ9BXL5 484 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 MTG2Q9H4K7 406 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 LHX3Q9UBR4 397 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 SEPT3Q9UH03 358 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 AMACRQ9UHK6 382 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 SCML1Q9UN30 329 aa15.18■□□□□ 0.02
CDC42SE1-203ENST00000470278 KCNK3O14649 394 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 RNASEH1O60930 286 aaKnown RBP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 IGLV3-19P01714 112 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 RECQLP46063 649 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 RENBPP51606 427 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 RHOAP61586 193 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 RPS14P62263 151 aaKnown RBP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 XRCC4Q13426 336 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 PRKD1Q15139 912 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 NOMO1Q15155 1222 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 LLGL1Q15334 1064 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 CYTH1Q15438 398 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 LPAL2Q16609 132 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 CARD16Q5EG05 197 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 NPNTQ6UXI9 565 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 LEKR1Q6ZMV7 388 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 TMPRSS6Q8IU80 811 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 CCDC13Q8IYE1 715 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 BBS5Q8N3I7 341 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 TTC13Q8NBP0 860 aa15.17■□□□□ 0.02
CDC42SE1-203ENST00000470278 NSMCE1Q8WV22 266 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms