RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 RUNX3Q13761 415 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 CYTH1Q15438 398 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 GAB4Q2WGN9 574 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 PITRM1Q5JRX3 1037 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 ANKRD22Q5VYY1 191 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 LRRC8BQ6P9F7 803 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 PARM1Q6UWI2 310 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 TMC3Q7Z5M5 1100 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 LINC00523Q86TU6 105 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 PDIK1LQ8N165 341 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 ASIC4Q96FT7 647 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 TRMT61BQ9BVS5 477 aaKnown RBP12.96□□□□□ -0.33
TRAF4-208ENST00000469529 PLA2G2FQ9BZM2 168 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 POLR1EQ9GZS1 481 aaKnown RBP12.96□□□□□ -0.33
TRAF4-208ENST00000469529 LRRC40Q9H9A6 602 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 CD320Q9NPF0 282 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 HPS4Q9NQG7 708 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 RSPH14Q9UHP6 348 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 VPS51Q9UID3 782 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 VPS28Q9UK41 221 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 HS3ST2Q9Y278 367 aa12.96□□□□□ -0.33
TRAF4-208ENST00000469529 ARIH1Q9Y4X5 557 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-208ENST00000469529 TCRBV7S3A2A0A539 114 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 NEDD8-MDP1E9PL57 170 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 CBX4O00257 560 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 MAP2K7O14733 419 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 TMEM63AO94886 807 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 ASLP04424 464 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 HLA-DQB2P05538 268 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 APRTP07741 180 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 PABPC1P11940 636 aaKnown RBP12.95□□□□□ -0.34
TRAF4-208ENST00000469529 NFKB1P19838 968 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 PSMB4P28070 264 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 CD70P32970 193 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 ADRA1AP35348 466 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 DHX9Q08211 1270 aaKnown RBP12.95□□□□□ -0.34
TRAF4-208ENST00000469529 PREPLQ4J6C6 727 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-208ENST00000469529 ASTLQ6HA08 431 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-208ENST00000469529 RANBP10Q6VN20 620 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 CYS1Q717R9 158 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 CENPUQ71F23 418 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 HDXQ7Z353 690 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 PRPF39Q86UA1 669 aaKnown RBP12.95□□□□□ -0.34
TRAF4-208ENST00000469529 ADIPOR2Q86V24 386 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 CAND1Q86VP6 1230 aaKnown RBP12.95□□□□□ -0.34
TRAF4-208ENST00000469529 YAF2Q8IY57 180 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 APCDD1Q8J025 514 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 IQCKQ8N0W5 287 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 GJD3Q8N144 294 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 AHI1Q8N157 1196 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 PGBD5Q8N414 524 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 CPA6Q8N4T0 437 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 PDCD7Q8N8D1 485 aaKnown RBP12.95□□□□□ -0.34
TRAF4-208ENST00000469529 FGF14Q92915 247 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 CEP44Q9C0F1 390 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 PABPC3Q9H361 631 aaKnown RBP12.95□□□□□ -0.34
TRAF4-208ENST00000469529 PLK2Q9NYY3 685 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 PRKAG3Q9UGI9 489 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 GGA2Q9UJY4 613 aa12.95□□□□□ -0.34
TRAF4-208ENST00000469529 XIRP2A4UGR9 3374 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 LOC285095A0A1B0GVY8 99 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 MAGEB16A2A368 324 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 E7EVH7 732 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 NEBLO76041 1014 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 MMP2P08253 660 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 MAPK8P45983 427 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 NPY2RP49146 381 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 SERPINH1P50454 418 aaKnown RBP12.94□□□□□ -0.34
TRAF4-208ENST00000469529 NIPAL4Q0D2K0 466 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 EIF4HQ15056 248 aaKnown RBP12.94□□□□□ -0.34
TRAF4-208ENST00000469529 SMAD2Q15796 467 aaKnown RBP12.94□□□□□ -0.34
TRAF4-208ENST00000469529 HIF1AQ16665 826 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 ALS2CLQ60I27 953 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 NAPEPLDQ6IQ20 393 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 KDELC1Q6UW63 502 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 ZNF354CQ86Y25 554 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 CCNJLQ8IV13 435 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 SUGP1Q8IWZ8 645 aaKnown RBP12.94□□□□□ -0.34
TRAF4-208ENST00000469529 TTC16Q8NEE8 873 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 OXNAD1Q96HP4 312 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-208ENST00000469529 SERPINB12Q96P63 405 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 NUDCD1Q96RS6 583 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 RBM15Q96T37 977 aaKnown RBP eCLIP12.94□□□□□ -0.347e-7■■■■□ 24.5
TRAF4-208ENST00000469529 NAT9Q9BTE0 207 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 MLPHQ9BV36 600 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-208ENST00000469529 PHF7Q9BWX1 381 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-208ENST00000469529 FUT8Q9BYC5 575 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 CASS4Q9NQ75 786 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 DEC1Q9P2X7 70 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 CHD5Q8TDI0 1954 aa12.94□□□□□ -0.34
TRAF4-208ENST00000469529 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
TRAF4-208ENST00000469529 OTOL1A6NHN0 477 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-208ENST00000469529 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-208ENST00000469529 MUSKO15146 869 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 INSIG1O15503 277 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ATP9BO43861 1147 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 SNAP91O60641 907 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 TULP3O75386 442 aa12.93□□□□□ -0.34
TRAF4-208ENST00000469529 ZNF821O75541 412 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms