RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 LCA5LO95447 670 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 GSRP00390 522 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 IGHV4-34P06331 123 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 FECHP22830 423 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 MAOBP27338 520 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 CDC25BP30305 580 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 CYLC1P35663 651 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-206ENST00000465877 DNA2P51530 1060 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 LIMK1P53667 647 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 CDH6P55285 790 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 TAS2R40P59535 323 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 DUOXA1Q1HG43 343 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 RSPO4Q2I0M5 234 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-206ENST00000465877 CARD16Q5EG05 197 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 AFMIDQ63HM1 303 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 SLC23A3Q6PIS1 610 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 NCEH1Q6PIU2 408 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 POLNQ7Z5Q5 900 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 CCDC170Q8IYT3 715 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 NETO2Q8NC67 525 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 OR2AP1Q8NGE2 309 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 OR2T34Q8NGX1 318 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 OR6K2Q8NGY2 324 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 CEP76Q8TAP6 659 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 CASKIN2Q8WXE0 1202 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 TSC1Q92574 1164 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 BIRC7Q96CA5 298 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 PPP1R16AQ96I34 528 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 ANP32EQ9BTT0 268 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 NUSAP1Q9BXS6 441 aaKnown RBP13.13□□□□□ -0.31
COL5A1-206ENST00000465877 SLC39A8Q9C0K1 460 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 MIR1-1HGQ9H1L0 117 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 SP110Q9HB58 689 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 ETNK2Q9NVF9 386 aa13.13□□□□□ -0.31
COL5A1-206ENST00000465877 RCOR3Q9P2K3 495 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-206ENST00000465877 UBA2Q9UBT2 640 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-206ENST00000465877 EIF2B4Q9UI10 523 aaKnown RBP13.13□□□□□ -0.31
COL5A1-206ENST00000465877 SOWAHDA6NJG2 315 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 C10orf142B7Z368 130 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 RNF103O00237 685 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 DFFAO00273 331 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 PRAMEF11O60813 436 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 LEFTY1O75610 366 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 IGSF6O95976 241 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 SERPINF2P08697 491 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 CD48P09326 243 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 GNSP15586 552 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 SERPINB6P35237 376 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 ID4P47928 161 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 RHOAP61586 193 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 SNRPD1P62314 119 aaKnown RBP13.12□□□□□ -0.31
COL5A1-206ENST00000465877 PPP2CBP62714 309 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 PPP2CAP67775 309 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 IRX4P78413 519 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 DPYSL3Q14195 570 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 MESDQ14696 234 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 INO80DQ53TQ3 878 aaPredicted RBP13.12□□□□□ -0.31
COL5A1-206ENST00000465877 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 ATXN7L2Q5T6C5 722 aaPredicted RBP13.12□□□□□ -0.31
COL5A1-206ENST00000465877 PIP5KL1Q5T9C9 394 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 KIAA0895LQ68EN5 471 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 TMCO3Q6UWJ1 677 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
COL5A1-206ENST00000465877 LZTR1Q8N653 840 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 TMIEQ8NEW7 156 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 OR14C36Q8NHC7 312 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 FAM71BQ8TC56 605 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 ARRDC3Q96B67 414 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 EXOC2Q96KP1 924 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 GDAP1L1Q96MZ0 367 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 HEPHQ9BQS7 1158 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 ZNF670Q9BS34 389 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 CALN1Q9BXU9 219 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 CAPN10Q9HC96 672 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 FSCN3Q9NQT6 498 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 DYRK4Q9NR20 520 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 DLL3Q9NYJ7 618 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 HECAQ9UBI9 543 aaPredicted RBP13.12□□□□□ -0.31
COL5A1-206ENST00000465877 SLC6A14Q9UN76 642 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 SLCO1B1Q9Y6L6 691 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 TRPM6Q9BX84 2022 aa13.12□□□□□ -0.31
COL5A1-206ENST00000465877 A0A1B0GTW7 788 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 J3KR12 359 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 BCAT2O15382 392 aaPredicted RBP13.11□□□□□ -0.31
COL5A1-206ENST00000465877 MFSD11O43934 449 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 KRT7P08729 469 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 ENGP17813 658 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 SDHBP21912 280 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 AMPD1P23109 780 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 ITGB7P26010 798 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 MAGEA1P43355 309 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
COL5A1-206ENST00000465877 ARSEP51690 589 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 MMRN1Q13201 1228 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 TCEAL1Q15170 157 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 SPA17Q15506 151 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.11□□□□□ -0.31
COL5A1-206ENST00000465877 ARHGAP36Q6ZRI8 547 aa13.11□□□□□ -0.31
COL5A1-206ENST00000465877 PARS2Q7L3T8 475 aaKnown RBP13.11□□□□□ -0.31
COL5A1-206ENST00000465877 TP53INP2Q8IXH6 220 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms