RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CSTF3Q12996 717 aaKnown RBP11.69□□□□□ -0.54
PTCH1-208ENST00000430669 CAPRIN2Q6IMN6 1127 aaKnown RBP11.69□□□□□ -0.54
PTCH1-208ENST00000430669 TRIM48Q8IWZ4 208 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 PDP2Q9P2J9 529 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 FZD10Q9ULW2 581 aa11.69□□□□□ -0.54
PTCH1-208ENST00000430669 IFNA14P01570 189 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 KCNE1P15382 129 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ADRA1BP35368 520 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ARMC6Q6NXE6 501 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 OOSP2Q86WS3 158 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 DTX3LQ8TDB6 740 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 SLC44A1Q8WWI5 657 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 CEP19Q96LK0 163 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 KCTD15Q96SI1 283 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 MLPHQ9BV36 600 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ZNF487B1APH4 448 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 TCEA3O75764 348 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ITGA2BP08514 1039 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 HPCAL1P37235 193 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 MAPKAPK2P49137 400 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 GLUD2P49448 558 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 TEPSINQ96N21 525 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ADAMTS3O15072 1205 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 SHOX2O60902 331 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 BMP10O95393 424 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ACADMP11310 421 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 PTPN3P26045 913 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 GRK4P32298 578 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 P2RY11Q96G91 374 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 TRMOQ9BU70 441 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 SKAP2O75563 359 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 SERPINA6P08185 405 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 BMPR2Q13873 1038 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 SETMARQ53H47 684 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 KIAA0408Q6ZU52 694 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ATL1Q8WXF7 558 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 MCRS1Q96EZ8 462 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 PCED1BQ96HM7 432 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 VRTNQ9H8Y1 702 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ENOPH1Q9UHY7 261 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 TRIM16O95361 564 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 CALCAP01258 141 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 HNRNPH1P31943 449 aaKnown RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 TBL3Q12788 808 aaKnown RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 NPAS4Q8IUM7 802 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 DENND1CQ8IV53 801 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 CEP41Q9BYV8 373 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ADH1CP00326 375 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 LPOP22079 712 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 RAP1GDS1P52306 607 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 YBEYP58557 167 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-208ENST00000430669 ATP6V0D1P61421 351 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 INCA1Q0VD86 236 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 TRIP10Q15642 601 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 TMEM174Q8WUU8 243 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 CRYGNQ8WXF5 182 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 BHMTQ93088 406 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 RHOJQ9H4E5 214 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 POMKQ9H5K3 350 aa11.68□□□□□ -0.54
PTCH1-208ENST00000430669 FAM237BA0A1B0GVD1 139 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 CCDC154A6NI56 674 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 KCNA3P22001 575 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 SAMD4BQ5PRF9 694 aaKnown RBP11.67□□□□□ -0.54
PTCH1-208ENST00000430669 TRABD2AQ86V40 505 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 CENPLQ8N0S6 344 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-208ENST00000430669 KCTD13Q8WZ19 329 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 CCT7Q99832 543 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 CYP4F12Q9HCS2 524 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 NDUFA13Q9P0J0 144 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 DOLKQ9UPQ8 538 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 MGAT4DA6NG13 374 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 RHOQP17081 205 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 GHRHRQ02643 423 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 UBE2E3Q969T4 207 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 CIPCQ9C0C6 399 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 FBXW11Q9UKB1 542 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 E9PAM4 449 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 ATP5F1P24539 256 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-208ENST00000430669 ZBTB17Q13105 803 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 FASTKQ14296 549 aaKnown RBP11.67□□□□□ -0.54
PTCH1-208ENST00000430669 AP1ARQ63HQ0 302 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 CYGBQ8WWM9 190 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 FCRL2Q96LA5 508 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-208ENST00000430669 KIAA1522Q9P206 1035 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-208ENST00000430669 SQORQ9Y6N5 450 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 SNX3O60493 162 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 NFKB1P19838 968 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 CDH5P33151 784 aaPredicted RBP11.67□□□□□ -0.54
PTCH1-208ENST00000430669 SLC5A3P53794 718 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 ADCK2Q7Z695 626 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 ADAMTSL2Q86TH1 951 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 BORCS6Q96GS4 357 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 TSEN34Q9BSV6 310 aaKnown RBP11.67□□□□□ -0.54
PTCH1-208ENST00000430669 MYLK2Q9H1R3 596 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 RAD21L1Q9H4I0 556 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 TBC1D14Q9P2M4 693 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 ALBP02768 609 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 COL6A1P12109 1028 aa11.67□□□□□ -0.54
PTCH1-208ENST00000430669 STARD3Q14849 445 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms