RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 FAM172BPA6NC97 362 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.96□□□□□ -0.33
HERC3-203ENST00000407637 XYLBO75191 536 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 TPPPO94811 219 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 HDCP19113 662 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 GARTP22102 1010 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 CRADDP78560 199 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 FSTL1Q12841 308 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 PITRM1Q5JRX3 1037 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 SLC39A4Q6P5W5 647 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 SLC16A12Q6ZSM3 486 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 DEPDC4Q8N2C3 294 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 S100ZQ8WXG8 99 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 SGCDQ92629 289 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 NRBF2Q96F24 287 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 FUNDC2Q9BWH2 189 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 ILKAPQ9H0C8 392 aaPredicted RBP12.96□□□□□ -0.33
HERC3-203ENST00000407637 PKD2L1Q9P0L9 805 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 AXIN1O15169 862 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 GRID2O43424 1007 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 DYRK3O43781 588 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 ALX3O95076 343 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 F7P08709 466 aaPredicted RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 JUNBP17275 347 aaPredicted RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 CCND2P30279 289 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 CASP3P42574 277 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 NAMPTP43490 491 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 PSMD8P48556 350 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 MCCD1P59942 119 aaPredicted RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 RACK1P63244 317 aaKnown RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 TRAP1Q12931 704 aaKnown RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 POLD3Q15054 466 aaPredicted RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 GPR162Q16538 588 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 HADHQ16836 314 aaKnown RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 CCNYL2Q5T2Q4 361 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 LAYNQ6UX15 382 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 DHRSXQ8N5I4 330 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 ZNF606Q8WXB4 792 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 HDAC11Q96DB2 347 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 LRRC39Q96DD0 335 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 ATXN7L3BQ96GX2 97 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 FAM213AQ9BRX8 229 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 GATA5Q9BWX5 397 aaPredicted RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 UPF3AQ9H1J1 476 aaKnown RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 CD320Q9NPF0 282 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 MOCS1Q9NZB8 636 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 TBX20Q9UMR3 447 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 G3V2L1 256 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 AP3B1O00203 1094 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 DEAF1O75398 565 aaPredicted RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 RBL1P28749 1068 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 TUBA1BP68363 451 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 ATP6AP1Q15904 470 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 CYBRD1Q53TN4 286 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 PAGE2BQ5JRK9 111 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 RSBN1Q5VWQ0 802 aaPredicted RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 TDRD10Q5VZ19 366 aaKnown RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 CASC4Q6P4E1 433 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 TUBA1AQ71U36 451 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 USP37Q86T82 979 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 DHFR2Q86XF0 187 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 NATD1Q8N6N6 113 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 EMC1Q8N766 993 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 OR2T34Q8NGX1 318 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 OR2T3Q8NH03 318 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 PNPT1Q8TCS8 783 aaKnown RBP12.95□□□□□ -0.34
HERC3-203ENST00000407637 FIG4Q92562 907 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 NGLY1Q96IV0 654 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 YME1L1Q96TA2 773 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 MXRA8Q9BRK3 442 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 ZNF577Q9BSK1 485 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 DGCR6LQ9BY27 220 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 FZD1Q9UP38 647 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 UGT2A1Q9Y4X1 527 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 HES2Q9Y543 173 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 ANGPTL3Q9Y5C1 460 aa12.95□□□□□ -0.34
HERC3-203ENST00000407637 WDR27A2RRH5 827 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 RFPL2O75678 378 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 ITGBL1O95965 494 aaPredicted RBP12.94□□□□□ -0.34
HERC3-203ENST00000407637 ARP10275 920 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 MAGEA3P43357 314 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 P2RX3P56373 397 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 WNT7BP56706 349 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 SNRPFP62306 86 aaKnown RBP12.94□□□□□ -0.34
HERC3-203ENST00000407637 CNTN2Q02246 1040 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 NIPAL4Q0D2K0 466 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 TUBA3CQ13748 450 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 INSCQ1MX18 579 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 BROXQ5VW32 411 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 REP15Q6BDI9 236 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
HERC3-203ENST00000407637 C15orf39Q6ZRI6 1047 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 SCML4Q8N228 414 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 FKBP10Q96AY3 582 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 SPAG4Q9NPE6 437 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 MRPL40Q9NQ50 206 aaKnown RBP12.94□□□□□ -0.34
HERC3-203ENST00000407637 ARMC1Q9NVT9 282 aa12.94□□□□□ -0.34
HERC3-203ENST00000407637 PIH1D1Q9NWS0 290 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms