RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 PABPC3Q9H361 631 aaKnown RBP5.78□□□□□ -1.48
CNGA1-202ENST00000402813 MAGEE1Q9HCI5 957 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 NECTIN3Q9NQS3 549 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 ANKMY1Q9P2S6 941 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 POLKQ9UBT6 870 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 CHMP2BQ9UQN3 213 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 NOC2LQ9Y3T9 749 aaKnown RBP5.78□□□□□ -1.48
CNGA1-202ENST00000402813 PTPRMP28827 1452 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 C3P01024 1663 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 TMEM210A6NLX4 147 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 PRR23D1E9PI22 279 aaPredicted RBP5.78□□□□□ -1.48
CNGA1-202ENST00000402813 AQP7O14520 342 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 FOXP2O15409 715 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 CYP27B1O15528 508 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 MED24O75448 989 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 PSMD10O75832 226 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 KRT36O76013 467 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 KCNK5O95279 499 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 AK1P00568 194 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 KRT6BP04259 564 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 PRKCBP05771 671 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 EPHX1P07099 455 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 PRR23D2P0DMB1 279 aaPredicted RBP5.78□□□□□ -1.48
CNGA1-202ENST00000402813 RXRAP19793 462 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 EDNRBP24530 442 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 CHRNA3P32297 505 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 GABRB2P47870 512 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 KRT6CP48668 564 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 ACTR3P61158 418 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 RNF4P78317 190 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 ENPEPQ07075 957 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 CDC20Q12834 499 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 MYO1EQ12965 1108 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 IRF3Q14653 427 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 TTMPQ5BVD1 217 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 VARS2Q5ST30 1063 aaKnown RBP5.78□□□□□ -1.48
CNGA1-202ENST00000402813 ADGRF1Q5T601 910 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 GALNT18Q6P9A2 607 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 CCNJLQ8IV13 435 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 ADGRG2Q8IZP9 1017 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 SMARCC2Q8TAQ2 1214 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 TEX47Q8TBZ9 253 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 METTL6Q8TCB7 284 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 ISG20Q96AZ6 181 aaKnown RBP5.78□□□□□ -1.48
CNGA1-202ENST00000402813 SAMD8Q96LT4 415 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 TBC1D10AQ9BXI6 508 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 KLC2Q9H0B6 622 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 PCDH9Q9HC56 1237 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 EPB41L5Q9HCM4 733 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 ZDHHC18Q9NUE0 388 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 TAS2R10Q9NYW0 307 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 PLA2G3Q9NZ20 509 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 CYTH4Q9UIA0 394 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 DNPEPQ9ULA0 475 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 CYP8B1Q9UNU6 501 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 CCDC171Q6TFL3 1326 aa5.78□□□□□ -1.48
CNGA1-202ENST00000402813 GOLGA8OA6NCC3 632 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 SLC22A31A6NKX4 558 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 GOLGA8NF8WBI6 632 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 G3V3G9 751 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 HAX1O00165 279 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 ARVCFO00192 962 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 PODXLO00592 558 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 ZNF197O14709 1029 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 HRO43593 1189 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 CDK14O94921 469 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 HNRNPA2B1P22626 353 aaKnown RBP5.77□□□□□ -1.49
CNGA1-202ENST00000402813 ITPKAP23677 461 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 GBP1P32455 592 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 MAGEA9P43362 315 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 FNTBP49356 437 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 AARSP49588 968 aaKnown RBP eCLIP5.77□□□□□ -1.49
CNGA1-202ENST00000402813 PSMC5P62195 406 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 SOX4Q06945 474 aaPredicted RBP5.77□□□□□ -1.49
CNGA1-202ENST00000402813 SMARCB1Q12824 385 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 ABRQ12979 859 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 FADDQ13158 208 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 CLCA4Q14CN2 919 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 PCGF3Q3KNV8 242 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 GLE1Q53GS7 698 aaKnown RBP5.77□□□□□ -1.49
CNGA1-202ENST00000402813 SGO1Q5FBB7 561 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 FIGNQ5HY92 759 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 RAB41Q5JT25 222 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 CYB5D1Q6P9G0 228 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 BLOC1S2Q6QNY1 142 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 KCNT2Q6UVM3 1135 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 KDM8Q8N371 416 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 ATAD1Q8NBU5 361 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 TRPV3Q8NET8 790 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 TMIEQ8NEW7 156 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 ACTRT2Q8TDY3 377 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 CHURC1Q8WUH1 139 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 TNFRSF25Q93038 417 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 SPDL1Q96EA4 605 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 SLC41A2Q96JW4 573 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 IFIH1Q9BYX4 1025 aaKnown RBP5.77□□□□□ -1.49
CNGA1-202ENST00000402813 TRIM31Q9BZY9 425 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 MS4A5Q9H3V2 200 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 RMND5AQ9H871 391 aa5.77□□□□□ -1.49
CNGA1-202ENST00000402813 TRPC7Q9HCX4 862 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms