RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 NADKO95544 446 aaPredicted RBP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 TMEM191BP0C7N4 346 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 SNHG28P0DPA3 235 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 MX2P20592 715 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 MCCD1P59942 119 aaPredicted RBP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ACAP2Q15057 778 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 AOC3Q16853 763 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CYBRD1Q53TN4 286 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 FKBP9P1Q75LS8 142 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 PIGZQ86VD9 579 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CAND1Q86VP6 1230 aaKnown RBP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CAMK1DQ8IU85 385 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 LGI2Q8N0V4 545 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 PACRGLQ8N7B6 248 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 FEZF2Q8TBJ5 459 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 AGR3Q8TD06 166 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CANT1Q8WVQ1 401 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 SGCDQ92629 289 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 PPWD1Q96BP3 646 aaKnown RBP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 PPP1R36Q96LQ0 422 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 COQ7Q99807 217 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ALOXE3Q9BYJ1 711 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 SOX17Q9H6I2 414 aaPredicted RBP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 EFCAB1Q9HAE3 211 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 MRPL47Q9HD33 250 aaKnown RBP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 AP4E1Q9UPM8 1137 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 BOLA1Q9Y3E2 137 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 FAM159BA6NKW6 160 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 B8ZZF3 427 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 AP3B1O00203 1094 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ENPP3O14638 875 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 KRT6AP02538 564 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 KRT6BP04259 564 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CYP3A4P08684 503 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 POLD2P49005 469 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ART3Q13508 389 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 SELPLGQ14242 412 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 PLCL1Q15111 1095 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CDK10Q15131 360 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 LRRC38Q5VT99 294 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ZNF773Q6PK81 442 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 USP51Q70EK9 711 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ERMP1Q7Z2K6 904 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 FBXO33Q7Z6M2 555 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 LDHDQ86WU2 507 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 DAW1Q8N136 415 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 TOP1MTQ969P6 601 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 APBA2Q99767 749 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 BTBD2Q9BX70 525 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 C12orf4Q9NQ89 552 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 FAM149AA5PLN7 773 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 TMEM191CA6NGB0 347 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 SLC15A5A6NIM6 579 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 MSH4O15457 936 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CST8O60676 142 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CES1P23141 567 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 HTR1BP28222 390 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 S100A5P33763 92 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 NOMO3P69849 1222 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 PAGE2BQ5JRK9 111 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CATSPEREQ5SY80 951 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 NEK5Q6P3R8 708 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 LINC00299Q6ZSB3 139 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 SLCO6A1Q86UG4 719 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 SCML4Q8N228 414 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CYP2W1Q8TAV3 490 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 PNPT1Q8TCS8 783 aaKnown RBP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 CYGBQ8WWM9 190 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 MOCOSQ96EN8 888 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 SNX18Q96RF0 628 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ZBTB26Q9HCK0 441 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 ADA2Q9NZK5 511 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 HSPBP1Q9NZL4 362 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 TMEM216Q9P0N5 145 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 WRAP73Q9P2S5 460 aaPredicted RBP9.68□□□□□ -0.86
SF3A3-201ENST00000373019 RAD54BQ9Y620 910 aa9.68□□□□□ -0.86
SF3A3-201ENST00000373019 POLR1CO15160 346 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 TOMM70O94826 608 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 ELK4P28324 431 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 CCND2P30279 289 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 VAC14Q08AM6 782 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 CRTC3Q6UUV7 619 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 ZCCHC7Q8N3Z6 543 aaKnown RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 PCDH20Q8N6Y1 951 aaKnown RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 OR6F1Q8NGZ6 308 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 SEPT8Q92599 483 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 PI4K2AQ9BTU6 479 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 SEZ6LQ9BYH1 1024 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 SLC38A10Q9HBR0 1119 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 CD320Q9NPF0 282 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 TOPORSQ9NS56 1045 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 ZNF358Q9NW07 568 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 IP6K2Q9UHH9 426 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 NAV1Q8NEY1 1877 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 A0A0G2JMP0 313 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 NEMP1O14524 444 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms