RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PRKCHP24723 683 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 AVPR2P30518 371 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 MAN1A1P33908 653 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 GGT5P36269 586 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 EPS15P42566 896 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 RPP30P78346 268 aaKnown RBP6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 HOXA4Q00056 320 aaPredicted RBP6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 ALKBH1Q13686 389 aaKnown RBP6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 DEFB115Q30KQ5 88 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 CC2D1BQ5T0F9 858 aaKnown RBP6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 NAA35Q5VZE5 725 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 CCDC17Q96LX7 622 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 FUZQ9BT04 418 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 TEX13AQ9BXU3 409 aaPredicted RBP6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 CTDSP1Q9GZU7 261 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 OSBPL5Q9H0X9 879 aaPredicted RBP6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 MROH8Q9H579 483 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 IL17RBQ9NRM6 502 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 AASSQ9UDR5 926 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 KLQ9UEF7 1012 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 HACL1Q9UJ83 578 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 SIRT4Q9Y6E7 314 aaPredicted RBP6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 COL4A5P29400 1685 aa6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 TNRC6CQ9HCJ0 1690 aaKnown RBP6.1□□□□□ -1.43
RNU4-39P-201ENST00000362455 COL3A1P02461 1466 aaPredicted RBP6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 SBF1O95248 1867 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 WDR33Q9C0J8 1336 aaKnown RBP6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 FAM90A7PA6NKC0 464 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 SH2D7A6NKC9 451 aaPredicted RBP6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 FAM90A22PA8MWA6 464 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 FAM90A12PA8MX19 464 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 FAM90A23PA8MXZ1 464 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 H7C1Q1 480 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 SPTLC2O15270 562 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 GUCY1B2O75343 617 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 CNTN5O94779 1100 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 RTN3O95197 1032 aaPredicted RBP6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 METTL18O95568 372 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 ARSAP15289 507 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 KRT4P19013 534 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 RGS19P49795 217 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 ZNF84P51523 738 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 MVDP53602 400 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 GOLGA8FQ08AF8 430 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 DMWDQ09019 674 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 TEFQ10587 303 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 SLC14A1Q13336 389 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 CRY2Q49AN0 593 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 AWAT1Q58HT5 328 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 GPATCH4Q5T3I0 446 aaKnown RBP6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 VSTM1Q6UX27 236 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 SERPINA13PQ6UXR4 307 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 NBPF5PQ86XG9 351 aaPredicted RBP6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 SCN4BQ8IWT1 228 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 NEU4Q8WWR8 484 aaPredicted RBP6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 REPS1Q96D71 796 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 C7orf26Q96N11 449 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 FYTTD1Q96QD9 318 aaKnown RBP6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 TRIM31Q9BZY9 425 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 OLA1Q9NTK5 396 aaKnown RBP6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 BLOC1S4Q9NUP1 217 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 MIS18AQ9NYP9 233 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 SH3BP4Q9P0V3 963 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 SWAP70Q9UH65 585 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 ADAM21Q9UKJ8 722 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 CNPY2Q9Y2B0 182 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 MYRFQ9Y2G1 1151 aa6.09□□□□□ -1.43
RNU4-39P-201ENST00000362455 TMEM191CA6NGB0 347 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 BTBD19C9JJ37 291 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 TULP3O75386 442 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 JTBO76095 146 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 RFPL3SP0C7P2 107 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 BUD31P41223 144 aaPredicted RBP6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 RPS6KA3P51812 740 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 ABHD18Q0P651 414 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 PUM1Q14671 1186 aaKnown RBP eCLIP6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 KPNB1Q14974 876 aaKnown RBP6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 GXYLT1Q4G148 440 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 CCDC30Q5VVM6 783 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 MTFR2Q6P444 385 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 CRIP3Q6Q6R5 217 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 SLC22A25Q6T423 547 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 DLK2Q6UY11 383 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 H1FNTQ75WM6 255 aaPredicted RBP6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 MCM10Q7L590 875 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 CHD1LQ86WJ1 897 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 ARMC8Q8IUR7 673 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 GPC2Q8N158 579 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 VPS52Q8N1B4 723 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 TDRD7Q8NHU6 1098 aaKnown RBP6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 ADAMTS18Q8TE60 1221 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 ATP2A3Q93084 1043 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 ABHD14AQ9BUJ0 271 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 TRIM2Q9C040 744 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 TMX4Q9H1E5 349 aaPredicted RBP6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 PRDM13Q9H4Q3 707 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 CPNE5Q9HCH3 593 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 SLC25A13Q9UJS0 675 aa6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 NIP7Q9Y221 180 aaKnown RBP eCLIP6.08□□□□□ -1.44
RNU4-39P-201ENST00000362455 ABCC12Q96J65 1359 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms