RNA–Protein interactions for RNA: ENST00000354334.7

HDAC7-202, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDAC7, Length 4,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-202ENST00000354334 UNC5BQ8IZJ1 945 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 FOPNLQ96NB1 174 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 PNPOQ9NVS9 261 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
HDAC7-202ENST00000354334 ATP6AP2A0A1C7CYW4 349 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 BTN3A1O00481 513 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 ADCY6O43306 1168 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 ATP6AP2O75787 350 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 BAIAP3O94812 1187 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 STBD1O95210 358 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 AP2A1O95782 977 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 EPHA3P29320 983 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 LDLRAD1Q5T700 205 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 ARCQ7LC44 396 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 ITIH5Q86UX2 942 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 MYO1HQ8N1T3 1032 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 SPPL2BQ8TCT7 592 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 ZNF398Q8TD17 642 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 AZIN2Q96A70 460 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 MARK4Q96L34 752 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 THUMPD3Q9BV44 507 aaKnown RBP13.28□□□□□ -0.28
HDAC7-202ENST00000354334 NMUR2Q9GZQ4 415 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 CNTN3Q9P232 1028 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 MYH9P35579 1960 aaKnown RBP13.28□□□□□ -0.28
HDAC7-202ENST00000354334 KATNA1O75449 491 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 CSH1P0DML2 217 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 CSH2P0DML3 217 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 HNRNPLP14866 589 aaKnown RBP eCLIP13.28□□□□□ -0.283e-6■■■■□ 20
HDAC7-202ENST00000354334 PTPN3P26045 913 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 PURAQ00577 322 aaKnown RBP13.28□□□□□ -0.28
HDAC7-202ENST00000354334 UBAP2LQ14157 1087 aaKnown RBP13.28□□□□□ -0.28
HDAC7-202ENST00000354334 GALNT3Q14435 633 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 USP41Q3LFD5 358 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 LRRC49Q8IUZ0 686 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 ZDHHC14Q8IZN3 488 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 MPP5Q8N3R9 675 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 RSPH1Q8WYR4 309 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 CDRT15Q96T59 188 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 TTPALQ9BTX7 342 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.28□□□□□ -0.283e-6■■■■□ 24.3
HDAC7-202ENST00000354334 RUBCNLQ9H714 662 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 BPIFA1Q9NP55 256 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 FBXW11Q9UKB1 542 aa13.28□□□□□ -0.28
HDAC7-202ENST00000354334 CLUHO75153 1309 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 CCL22O00626 93 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 NRP1O14786 923 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 CDH5P33151 784 aaPredicted RBP13.27□□□□□ -0.28
HDAC7-202ENST00000354334 GABRB2P47870 512 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 SH3BGRP55822 239 aaPredicted RBP13.27□□□□□ -0.28
HDAC7-202ENST00000354334 CCDC142Q17RM4 750 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 WASHC2DQ5SRD0 308 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 RFWD3Q6PCD5 774 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 EFL1Q7Z2Z2 1120 aaKnown RBP13.27□□□□□ -0.28
HDAC7-202ENST00000354334 CLNKQ7Z7G1 428 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 CATSPER1Q8NEC5 780 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 CNDP1Q96KN2 507 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 B3GALT6Q96L58 329 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 SLC9A7Q96T83 725 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 CCDC90BQ9GZT6 254 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 PLK2Q9NYY3 685 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 WARS2Q9UGM6 360 aaKnown RBP13.27□□□□□ -0.28
HDAC7-202ENST00000354334 ANKRD6Q9Y2G4 727 aa13.27□□□□□ -0.28
HDAC7-202ENST00000354334 ECHS1P30084 290 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 ABL2P42684 1182 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 CDH13P55290 713 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 RAB10P61026 200 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 CDK18Q07002 472 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 VARS2Q5ST30 1063 aaKnown RBP13.27□□□□□ -0.29
HDAC7-202ENST00000354334 YAF2Q8IY57 180 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 SYT11Q9BT88 431 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 PIF1Q9H611 641 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 SLC17A6Q9P2U8 582 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 ADAM28Q9UKQ2 775 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 SNX13Q9Y5W8 968 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 OR6C75A6NL08 312 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 E9PAM4 449 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 SPATA31D3P0C874 917 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 PKNOX1P55347 436 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 NR6A1Q15406 480 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 IZUMO2Q6UXV1 221 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 SPATA31D4Q6ZUB0 917 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 LDB1Q86U70 411 aaPredicted RBP13.27□□□□□ -0.29
HDAC7-202ENST00000354334 EFCAB3Q8N7B9 438 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 ECSITQ9BQ95 431 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 RHOJQ9H4E5 214 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 CATSPERZQ9NTU4 200 aa13.27□□□□□ -0.29
HDAC7-202ENST00000354334 SDK1Q7Z5N4 2213 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 PRR23AA6NEV1 266 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 PRR5-ARHGAP8B1AHC4 643 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 SP100P23497 879 aaPredicted RBP13.26□□□□□ -0.29
HDAC7-202ENST00000354334 PAX3P23760 479 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 ARHGAP8P85298 464 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 BCL2L1Q07817 233 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 CXorf38Q8TB03 319 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 BTN2A3PQ96KV6 586 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 ZNF558Q96NG5 402 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 ACOX2Q99424 681 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 PHACTR1Q9C0D0 580 aa13.26□□□□□ -0.29
HDAC7-202ENST00000354334 CHKBQ9Y259 395 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms