RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 OGFOD2Q6N063 350 aa18.05■□□□□ 0.48
APP-202ENST00000348990 CHSY3Q70JA7 882 aa18.05■□□□□ 0.48
APP-202ENST00000348990 IRGQQ8WZA9 623 aa18.05■□□□□ 0.48
APP-202ENST00000348990 EXT2Q93063 718 aa18.05■□□□□ 0.48
APP-202ENST00000348990 SPATA33Q96N06 139 aa18.05■□□□□ 0.48
APP-202ENST00000348990 GMLQ99445 158 aa18.05■□□□□ 0.48
APP-202ENST00000348990 POMKQ9H5K3 350 aa18.05■□□□□ 0.48
APP-202ENST00000348990 MRPL40Q9NQ50 206 aaKnown RBP18.05■□□□□ 0.48
APP-202ENST00000348990 FAIMQ9NVQ4 179 aa18.05■□□□□ 0.48
APP-202ENST00000348990 CNOT6Q9ULM6 557 aaKnown RBP18.05■□□□□ 0.48
APP-202ENST00000348990 SQORQ9Y6N5 450 aa18.05■□□□□ 0.48
APP-202ENST00000348990 TRPC5OSA6NMA1 111 aa18.05■□□□□ 0.48
APP-202ENST00000348990 J3QRK9 145 aa18.05■□□□□ 0.48
APP-202ENST00000348990 TADA2AO75478 443 aa18.05■□□□□ 0.48
APP-202ENST00000348990 VTNP04004 478 aa18.05■□□□□ 0.48
APP-202ENST00000348990 FAM219BQ5XKK7 198 aa18.05■□□□□ 0.48
APP-202ENST00000348990 FBXL8Q96CD0 374 aa18.05■□□□□ 0.48
APP-202ENST00000348990 SPAG4Q9NPE6 437 aa18.05■□□□□ 0.48
APP-202ENST00000348990 NCKIPSDQ9NZQ3 722 aa18.05■□□□□ 0.48
APP-202ENST00000348990 PADI4Q9UM07 663 aa18.05■□□□□ 0.48
APP-202ENST00000348990 TNFSF13BQ9Y275 285 aa18.05■□□□□ 0.48
APP-202ENST00000348990 C9IYK1 514 aa18.04■□□□□ 0.48
APP-202ENST00000348990 SOCS2O14508 198 aa18.04■□□□□ 0.48
APP-202ENST00000348990 ZBTB24O43167 697 aaPredicted RBP18.04■□□□□ 0.48
APP-202ENST00000348990 APBA3O96018 575 aa18.04■□□□□ 0.48
APP-202ENST00000348990 LRPAP1P30533 357 aa18.04■□□□□ 0.48
APP-202ENST00000348990 POU6F1Q14863 301 aa18.04■□□□□ 0.48
APP-202ENST00000348990 PPP1R3AQ16821 1122 aa18.04■□□□□ 0.48
APP-202ENST00000348990 ZNF597Q96LX8 424 aa18.04■□□□□ 0.48
APP-202ENST00000348990 CROTQ9UKG9 612 aa18.04■□□□□ 0.48
APP-202ENST00000348990 AHDC1Q5TGY3 1603 aaPredicted RBP18.04■□□□□ 0.48
APP-202ENST00000348990 NRP1O14786 923 aa18.04■□□□□ 0.48
APP-202ENST00000348990 PPEF2O14830 753 aa18.04■□□□□ 0.48
APP-202ENST00000348990 ZBTB11O95625 1053 aaPredicted RBP18.04■□□□□ 0.48
APP-202ENST00000348990 TRAF2Q12933 501 aa18.04■□□□□ 0.48
APP-202ENST00000348990 BNIP3Q12983 259 aa18.04■□□□□ 0.48
APP-202ENST00000348990 CSHL1Q14406 222 aa18.04■□□□□ 0.48
APP-202ENST00000348990 TREML2Q5T2D2 321 aa18.04■□□□□ 0.48
APP-202ENST00000348990 SAMD7Q7Z3H4 446 aa18.04■□□□□ 0.48
APP-202ENST00000348990 AFAP1L2Q8N4X5 818 aa18.04■□□□□ 0.48
APP-202ENST00000348990 FAM110BQ8TC76 370 aa18.04■□□□□ 0.48
APP-202ENST00000348990 SLC2A11Q9BYW1 496 aa18.04■□□□□ 0.48
APP-202ENST00000348990 UNC93B1Q9H1C4 597 aa18.04■□□□□ 0.48
APP-202ENST00000348990 FZD8Q9H461 694 aa18.04■□□□□ 0.48
APP-202ENST00000348990 PCDHGA7Q9Y5G6 932 aa18.04■□□□□ 0.48
APP-202ENST00000348990 COL2A1P02458 1487 aaPredicted RBP18.04■□□□□ 0.48
APP-202ENST00000348990 TRIP11Q15643 1979 aa18.04■□□□□ 0.48
APP-202ENST00000348990 JCHAINP01591 159 aa18.04■□□□□ 0.48
APP-202ENST00000348990 MAP4P27816 1152 aaKnown RBP18.04■□□□□ 0.48
APP-202ENST00000348990 YAP1P46937 504 aaKnown RBP18.04■□□□□ 0.48
APP-202ENST00000348990 TXNL4AP83876 142 aaKnown RBP18.04■□□□□ 0.48
APP-202ENST00000348990 SLC12A1Q13621 1099 aa18.04■□□□□ 0.48
APP-202ENST00000348990 SEPT6Q14141 434 aa18.04■□□□□ 0.48
APP-202ENST00000348990 REP15Q6BDI9 236 aa18.04■□□□□ 0.48
APP-202ENST00000348990 TMEM110Q86TL2 294 aa18.04■□□□□ 0.48
APP-202ENST00000348990 NT5DC4Q86YG4 428 aa18.04■□□□□ 0.48
APP-202ENST00000348990 DENND6AQ8IWF6 608 aa18.04■□□□□ 0.48
APP-202ENST00000348990 PTPRHQ9HD43 1115 aa18.04■□□□□ 0.48
APP-202ENST00000348990 STX1BP61266 288 aa18.03■□□□□ 0.48
APP-202ENST00000348990 TNFAIP2Q03169 654 aa18.03■□□□□ 0.48
APP-202ENST00000348990 PRKCQQ04759 706 aa18.03■□□□□ 0.48
APP-202ENST00000348990 CXCL9Q07325 125 aa18.03■□□□□ 0.48
APP-202ENST00000348990 SLC35F5Q8WV83 523 aa18.03■□□□□ 0.48
APP-202ENST00000348990 COPS5Q92905 334 aa18.03■□□□□ 0.48
APP-202ENST00000348990 CLOCKO15516 846 aa18.03■□□□□ 0.48
APP-202ENST00000348990 GABBR2O75899 941 aa18.03■□□□□ 0.48
APP-202ENST00000348990 TOMM70O94826 608 aa18.03■□□□□ 0.48
APP-202ENST00000348990 MPP1Q00013 466 aa18.03■□□□□ 0.48
APP-202ENST00000348990 MAPRE2Q15555 327 aa18.03■□□□□ 0.48
APP-202ENST00000348990 ZNF280DQ6N043 979 aa18.03■□□□□ 0.48
APP-202ENST00000348990 METTL7BQ6UX53 244 aa18.03■□□□□ 0.48
APP-202ENST00000348990 TMEM26Q6ZUK4 368 aa18.03■□□□□ 0.48
APP-202ENST00000348990 CARM1Q86X55 608 aa18.03■□□□□ 0.48
APP-202ENST00000348990 LRRC43Q8N309 656 aa18.03■□□□□ 0.48
APP-202ENST00000348990 PRMT7Q9NVM4 692 aaPredicted RBP18.03■□□□□ 0.48
APP-202ENST00000348990 TLL2Q9Y6L7 1015 aa18.03■□□□□ 0.48
APP-202ENST00000348990 LRRC37AA6NMS7 1700 aa18.02■□□□□ 0.48
APP-202ENST00000348990 ZCWPW2A0A1B0GU75 182 aa18.02■□□□□ 0.48
APP-202ENST00000348990 MT-ND1P03886 318 aa18.02■□□□□ 0.48
APP-202ENST00000348990 STMN1P16949 149 aa18.02■□□□□ 0.48
APP-202ENST00000348990 NFKB1P19838 968 aa18.02■□□□□ 0.48
APP-202ENST00000348990 CASP2P42575 452 aa18.02■□□□□ 0.48
APP-202ENST00000348990 MBTD1Q05BQ5 628 aa18.02■□□□□ 0.48
APP-202ENST00000348990 PLCL1Q15111 1095 aa18.02■□□□□ 0.48
APP-202ENST00000348990 SPPL2CQ8IUH8 684 aa18.02■□□□□ 0.48
APP-202ENST00000348990 SIX6OS1Q8N1H7 587 aa18.02■□□□□ 0.48
APP-202ENST00000348990 HOXC10Q9NYD6 342 aa18.02■□□□□ 0.48
APP-202ENST00000348990 IGSF9Q9P2J2 1179 aa18.02■□□□□ 0.48
APP-202ENST00000348990 VPS28Q9UK41 221 aa18.02■□□□□ 0.48
APP-202ENST00000348990 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.02■□□□□ 0.48
APP-202ENST00000348990 C1orf232A0A0U1RR37 186 aa18.02■□□□□ 0.48
APP-202ENST00000348990 KDM4FA0A1W2PPD8 638 aa18.02■□□□□ 0.48
APP-202ENST00000348990 PTPRAP18433 802 aa18.02■□□□□ 0.48
APP-202ENST00000348990 SLC7A1P30825 629 aa18.02■□□□□ 0.48
APP-202ENST00000348990 ALDH3B2P48448 385 aa18.02■□□□□ 0.48
APP-202ENST00000348990 CELF6Q96J87 481 aaKnown RBP18.02■□□□□ 0.48
APP-202ENST00000348990 COX4I2Q96KJ9 171 aa18.02■□□□□ 0.48
APP-202ENST00000348990 ASB7Q9H672 318 aa18.02■□□□□ 0.48
APP-202ENST00000348990 EIF2B3Q9NR50 452 aaKnown RBP18.02■□□□□ 0.48
APP-202ENST00000348990 CACNA2D2Q9NY47 1150 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms