RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 DOCK3Q8IZD9 2030 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 FNDC1Q4ZHG4 1894 aaPredicted RBP15.46■□□□□ 0.07
DDX56-201ENST00000258772 SLCO1B7G3V0H7 640 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 HAS3O00219 553 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 DLX3O60479 287 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 MT-CYBP00156 380 aaPredicted RBP15.46■□□□□ 0.07
DDX56-201ENST00000258772 DNAJB1P25685 340 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 ADSLP30566 484 aaPredicted RBP15.46■□□□□ 0.07
DDX56-201ENST00000258772 PPARGP37231 505 aaPredicted RBP15.46■□□□□ 0.07
DDX56-201ENST00000258772 RPL26P61254 145 aaKnown RBP15.46■□□□□ 0.07
DDX56-201ENST00000258772 ZNF33AQ06730 810 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 ST13P4Q8IZP2 240 aaPredicted RBP15.46■□□□□ 0.07
DDX56-201ENST00000258772 PQLC1Q8N2U9 271 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 ARHGAP18Q8N392 663 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 STON2Q8WXE9 905 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 LENG1Q96BZ8 264 aaPredicted RBP15.46■□□□□ 0.07
DDX56-201ENST00000258772 BTBD9Q96Q07 612 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 VPS28Q9UK41 221 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 INPP5FQ9Y2H2 1132 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 TBC1D30Q9Y2I9 924 aa15.46■□□□□ 0.07
DDX56-201ENST00000258772 SRGAP2BP0DMP2 458 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 CALRP27797 417 aaKnown RBP15.45■□□□□ 0.06
DDX56-201ENST00000258772 EPHX2P34913 555 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 ALDH1A3P47895 512 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 CLCNKBP51801 687 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 COG7P83436 770 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 CTBP1Q13363 440 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 GRM2Q14416 872 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 UGP2Q16851 508 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 GRAMD1BQ3KR37 738 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 LIN52Q52LA3 116 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 TMEM198Q66K66 360 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 LRRC8EQ6NSJ5 796 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 ARHGAP36Q6ZRI8 547 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 SETD3Q86TU7 594 aaPredicted RBP15.45■□□□□ 0.06
DDX56-201ENST00000258772 TLK2Q86UE8 772 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 DENND6AQ8IWF6 608 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 CNTN4Q8IWV2 1026 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 ICA1LQ8NDH6 482 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 BRI3BPQ8WY22 251 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 RNF34Q969K3 372 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 GPR78Q96P69 363 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 SLC38A7Q9NVC3 462 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 C6orf203Q9P0P8 240 aaPredicted RBP15.45■□□□□ 0.06
DDX56-201ENST00000258772 CDH9Q9ULB4 789 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 CDYLQ9Y232 598 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 VAPBO95292 243 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 JUNP05412 331 aaKnown RBP15.45■□□□□ 0.06
DDX56-201ENST00000258772 CCNCP24863 283 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 AFF1P51825 1210 aaKnown RBP15.45■□□□□ 0.06
DDX56-201ENST00000258772 THOP1P52888 689 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 MPP1Q00013 466 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 FOLH1Q04609 750 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 NSUN2Q08J23 767 aaKnown RBP eCLIP15.45■□□□□ 0.06
DDX56-201ENST00000258772 POU6F1Q14863 301 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 ZNF423Q2M1K9 1284 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 PIGGQ5H8A4 983 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 RASIP1Q5U651 963 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 NXNQ6DKJ4 435 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 BNC2Q6ZN30 1099 aaPredicted RBP15.45■□□□□ 0.06
DDX56-201ENST00000258772 SDCCAG8Q86SQ7 713 aaPredicted RBP15.45■□□□□ 0.06
DDX56-201ENST00000258772 TAC4Q86UU9 113 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 CEP97Q8IW35 865 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 NXNL1Q96CM4 212 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 RCN3Q96D15 328 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 SMARCD1Q96GM5 515 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 CATSPER2Q96P56 530 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 TBL1YQ9BQ87 522 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 SPATA16Q9BXB7 569 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 FTHL17Q9BXU8 183 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 RHOBTB2Q9BYZ6 727 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 XPR1Q9UBH6 696 aa15.45■□□□□ 0.06
DDX56-201ENST00000258772 DFFAO00273 331 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 PGK1P00558 417 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 ARCN1P48444 511 aaKnown RBP15.44■□□□□ 0.06
DDX56-201ENST00000258772 POLD2P49005 469 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 RAB10P61026 200 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 ZNF460Q14592 562 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 PDK3Q15120 406 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 OLFML2BQ68BL8 750 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 RWDD4Q6NW29 188 aaKnown RBP15.44■□□□□ 0.06
DDX56-201ENST00000258772 ESRP1Q6NXG1 681 aaKnown RBP15.44■□□□□ 0.06
DDX56-201ENST00000258772 MFSD6LQ8IWD5 586 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 C3orf58Q8NDZ4 430 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 PDCD6IPQ8WUM4 868 aaKnown RBP15.44■□□□□ 0.06
DDX56-201ENST00000258772 FCRL5Q96RD9 977 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 CENPKQ9BS16 269 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 TRIM4Q9C037 500 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 OSBPL2Q9H1P3 480 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 ZBTB26Q9HCK0 441 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 CSNK1G1Q9HCP0 422 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 DTNAQ9Y4J8 743 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 FAM95CA0A1B0GW59 222 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 CAPN8A6NHC0 703 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 THP07101 528 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 STMN1P16949 149 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 XRCC1P18887 633 aaPredicted RBP15.44■□□□□ 0.06
DDX56-201ENST00000258772 ARNTP27540 789 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 GSTT1P30711 240 aa15.44■□□□□ 0.06
DDX56-201ENST00000258772 SATB1Q01826 763 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms