RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	MRPL47	Q9HD33	250 aa	Known RBP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TM9SF3	Q9HD45	589 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	AP4E1	Q9UPM8	1137 aa		11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	LUC7L2	Q9Y383	392 aa	Known RBP	11.16	□□□□□ -0.62
PPP4R1-208	ENST00000578178	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	2e-6	■□□□□ 8.7
PPP4R1-208	ENST00000578178	TMEM131	Q92545	1883 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178		A0A1W2PPC4	97 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	WASH4P	A8MWX3	477 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	UPK3BL1	B0FP48	263 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	EIF3CL	B5ME19	914 aa	Known RBP	11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	UPK3BL2	E5RIL1	263 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PLK4	O00444	970 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PLRG1	O43660	514 aa	Known RBP	11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GJB3	O75712	270 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RNF8	O76064	485 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CER1	O95813	267 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CASP14	P31944	242 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TPI1	P60174	286 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PPP2CB	P62714	309 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PPP2CA	P67775	309 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CNTN1	Q12860	1018 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TRIM14	Q14142	442 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	POLD3	Q15054	466 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	IL27RA	Q6UWB1	636 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	DPY19L3	Q6ZPD9	716 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CHST14	Q8NCH0	376 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TMIE	Q8NEW7	156 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GRIN3A	Q8TCU5	1115 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PPP1R16A	Q96I34	528 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SLC6A18	Q96N87	628 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PEBP4	Q96S96	227 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	EIF3C	Q99613	913 aa	Known RBP	11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	NCAPG	Q9BPX3	1015 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SNRNP25	Q9BV90	132 aa	Known RBP	11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	DYRK4	Q9NR20	520 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GPATCH2L	Q9NWQ4	482 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MYO1A	Q9UBC5	1043 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	IL36A	Q9UHA7	158 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	HPCAL4	Q9UM19	191 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FCF1	Q9Y324	198 aa	Known RBP	11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178	KNL1	Q8NG31	2342 aa		11.15	□□□□□ -0.62
PPP4R1-208	ENST00000578178		A0A087X0T9	212 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178		A0A1B0GVT2	93 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	KPNA3	O00505	521 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	LAT	O43561	262 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PRPSAP2	O60256	369 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	LRCH4	O75427	683 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ZNF821	O75541	412 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CD160	O95971	181 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	FAM228B	P0C875	321 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CEACAM1	P13688	526 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	MIP	P30301	263 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	HNRNPH3	P31942	346 aa	Known RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CSNK1E	P49674	416 aa	Known RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CCNH	P51946	323 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	YBEY	P58557	167 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	RACK1	P63244	317 aa	Known RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	BNC1	Q01954	994 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CCDC15	Q0P6D6	951 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SLC14A1	Q13336	389 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CA9	Q16790	459 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PARP15	Q460N3	678 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PIP5KL1	Q5T9C9	394 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SPECC1L	Q69YQ0	1117 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	LAYN	Q6UX15	382 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ADAT2	Q7Z6V5	191 aa	Known RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PIP4P1	Q86T03	277 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TRIM69	Q86WT6	500 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ZNF354C	Q86Y25	554 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PSTK	Q8IV42	348 aa	Known RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ARFGAP1	Q8N6T3	406 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	RNF214	Q8ND24	703 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	DEFB124	Q8NES8	71 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ISG20	Q96AZ6	181 aa	Known RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ARRDC3	Q96B67	414 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TM6SF2	Q9BZW4	377 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	THAP2	Q9H0W7	228 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	SLC32A1	Q9H598	525 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	DHX35	Q9H5Z1	703 aa	Known RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	NOL6	Q9H6R4	1146 aa	Known RBP	11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PREB	Q9HCU5	417 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	DONSON	Q9NYP3	566 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ARHGAP20	Q9P2F6	1191 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PCSK1N	Q9UHG2	260 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	ACTL7A	Q9Y615	435 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	WASF2	Q9Y6W5	498 aa		11.14	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3D	A0A087WVF3	549 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3I	A0A087WXS9	549 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3E	A0A087X179	549 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3K	A0A087X1G2	549 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	PCNX2	A6NKB5	2137 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	TBC1D3L	B9A6J9	549 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	RASA4B	C9J798	803 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	EEF2K	O00418	725 aa	Known RBP	11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	GIPC1	O14908	333 aa		11.13	□□□□□ -0.63
PPP4R1-208	ENST00000578178	VILL	O15195	856 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms