RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 KCTD19Q17RG1 926 aaPredicted RBP17.58■□□□□ 0.4
PTPN21-208ENST00000556564 LRRC38Q5VT99 294 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 SUGP1Q8IWZ8 645 aaKnown RBP17.58■□□□□ 0.4
PTPN21-208ENST00000556564 LRRC34Q8IZ02 419 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 TNIP2Q8NFZ5 429 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 WARS2Q9UGM6 360 aaKnown RBP17.58■□□□□ 0.4
PTPN21-208ENST00000556564 SNX10Q9Y5X0 201 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 ABHD14A-ACY1A0A1B0GW23 586 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 HTR1BP28222 390 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 SERPINB4P48594 390 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 FAM151BQ6UXP7 276 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 TNS4Q8IZW8 715 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 CLEC4FQ8N1N0 589 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 HDAC7Q8WUI4 952 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 MID1IP1Q9NPA3 183 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 DGKAP23743 735 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 AFTPHQ6ULP2 937 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 ALLCQ8N6M5 410 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 EVA1BQ9NVM1 165 aa17.58■□□□□ 0.4
PTPN21-208ENST00000556564 ZNF839A8K0R7 811 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 PER2O15055 1255 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 CLDN11O75508 207 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 TFE3P19532 575 aaPredicted RBP17.57■□□□□ 0.4
PTPN21-208ENST00000556564 GATMP50440 423 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 GJA9P57773 515 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 GPSM1Q86YR5 675 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 NDNQ99608 321 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 ST6GALNAC4Q9H4F1 302 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 STBD1O95210 358 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 CRTC3Q6UUV7 619 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 MYO19Q96H55 970 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 MAGEB18Q96M61 343 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 PCDH18Q9HCL0 1135 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 LAMB4A4D0S4 1761 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 E9PBE3 544 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 KLHL41O60662 606 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 FAAP100Q0VG06 881 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 NEPROQ6NW34 567 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 ABCG8Q9H221 673 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 RCCD1A6NED2 376 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 ATP6AP1LQ52LC2 224 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 MILR1Q7Z6M3 343 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 MAGEC3Q8TD91 643 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 SH3BP4Q9P0V3 963 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 SUFUQ9UMX1 484 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 PCDHGC5Q9Y5F6 944 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 RNASEH2AO75792 299 aaKnown RBP17.57■□□□□ 0.4
PTPN21-208ENST00000556564 TRIM32Q13049 653 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 CYP20A1Q6UW02 462 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 FERD3LQ96RJ6 166 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 MINDY3Q9H8M7 445 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 RAD54BQ9Y620 910 aa17.57■□□□□ 0.4
PTPN21-208ENST00000556564 RPL22P35268 128 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 ERVK-21P61565 698 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 ALDH6A1Q02252 535 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 LRRC36Q1X8D7 754 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 IRAK1BP1Q5VVH5 260 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 FAM126AQ9BYI3 521 aaPredicted RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 NOP53Q9NZM5 478 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 ANKRD6Q9Y2G4 727 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 A0A087X1B8 175 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 EIF2S1P05198 315 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 AQP5P55064 265 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 DMC1Q14565 340 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 RAB30Q15771 203 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 PKN2Q16513 984 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 ZCCHC9Q8N567 271 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 TPP1O14773 563 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 IL2P60568 153 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 ZC3H12BQ5HYM0 836 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 B4GALNT2Q8NHY0 566 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 DQX1Q8TE96 717 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 APOBEC3GQ9HC16 384 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 TRPC4Q9UBN4 977 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 A0A1W2PRU2 124 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 PAPSS1O43252 624 aaPredicted RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 KRT6AP02538 564 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 KRT6BP04259 564 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 FAM153BP0C7A2 387 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 EEF1DP29692 281 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 KRT20P35900 424 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 SLC1A6P48664 564 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 KRT6CP48668 564 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 SKOR1P84550 965 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 ABRQ12979 859 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 NPY5RQ15761 445 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 CCDC153Q494R4 210 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 FAM153CQ494X1 144 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 IRGQQ8WZA9 623 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 HNRNPABQ99729 332 aaKnown RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 AHSPQ9NZD4 102 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 HEY2Q9UBP5 337 aa17.56■□□□□ 0.4
PTPN21-208ENST00000556564 EVLQ9UI08 416 aaPredicted RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 FAF1Q9UNN5 650 aaPredicted RBP17.56■□□□□ 0.4
PTPN21-208ENST00000556564 ANXA11P50995 505 aaKnown RBP17.55■□□□□ 0.4
PTPN21-208ENST00000556564 WDR93Q6P2C0 686 aa17.55■□□□□ 0.4
PTPN21-208ENST00000556564 STRADAQ7RTN6 431 aa17.55■□□□□ 0.4
PTPN21-208ENST00000556564 C12orf50Q8NA57 414 aaPredicted RBP17.55■□□□□ 0.4
PTPN21-208ENST00000556564 ZNF555Q8NEP9 628 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms