RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ZNF217O75362 1048 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 PTPN7P35236 360 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 MARCKSL1P49006 195 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 FNTBP49356 437 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 PEX5P50542 639 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 RWDD2BP57060 319 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 DMWDQ09019 674 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 GALNT2Q10471 571 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 BYSLQ13895 437 aaKnown RBP19.8■□□□□ 0.76
DDX55-207ENST00000540763 TFDP2Q14188 446 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 RFTN1Q14699 578 aaPredicted RBP19.8■□□□□ 0.76
DDX55-207ENST00000540763 ACCSLQ4AC99 568 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 TMCO4Q5TGY1 634 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 ZNF776Q68DI1 518 aaPredicted RBP19.8■□□□□ 0.76
DDX55-207ENST00000540763 SPOCD1Q6ZMY3 1216 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 DSG4Q86SJ6 1040 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 C11orf74Q86VG3 221 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 TMPRSS6Q8IU80 811 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 UBL4BQ8N7F7 174 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 TRIM58Q8NG06 486 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 PRCCQ92733 491 aaPredicted RBP19.8■□□□□ 0.76
DDX55-207ENST00000540763 RNF25Q96BH1 459 aaPredicted RBP19.8■□□□□ 0.76
DDX55-207ENST00000540763 HES6Q96HZ4 224 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 MAK16Q9BXY0 300 aaKnown RBP19.8■□□□□ 0.76
DDX55-207ENST00000540763 SP110Q9HB58 689 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 LZTFL1Q9NQ48 299 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 UBA2Q9UBT2 640 aaPredicted RBP19.8■□□□□ 0.76
DDX55-207ENST00000540763 IPO11Q9UI26 975 aaKnown RBP19.8■□□□□ 0.76
DDX55-207ENST00000540763 FARP1Q9Y4F1 1045 aaPredicted RBP19.8■□□□□ 0.76
DDX55-207ENST00000540763 SPAG17Q6Q759 2223 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 CEP192Q8TEP8 1941 aa19.8■□□□□ 0.76
DDX55-207ENST00000540763 GVINP1Q7Z2Y8 2422 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 K7ERQ8 282 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 MCF2LO15068 1137 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 SMAD6O43541 496 aaKnown RBP19.79■□□□□ 0.76
DDX55-207ENST00000540763 GSRP00390 522 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 MX2P20592 715 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 HEATR6Q6AI08 1181 aaKnown RBP19.79■□□□□ 0.76
DDX55-207ENST00000540763 Q6ZVU0 165 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 ATPAF2Q8N5M1 289 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 PLD5Q8N7P1 536 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 GAB3Q8WWW8 586 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 OR8D1Q8WZ84 308 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 FATE1Q969F0 183 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 SIPA1Q96FS4 1042 aa19.79■□□□□ 0.76
DDX55-207ENST00000540763 USP36Q9P275 1121 aaKnown RBP19.79■□□□□ 0.76
DDX55-207ENST00000540763 hCG_1818297A0A087WSY0 165 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 MAFKO60675 156 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 ZNF821O75541 412 aaPredicted RBP19.78■□□□□ 0.76
DDX55-207ENST00000540763 TMCC1O94876 653 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 FTCDO95954 541 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 IGLV3-19P01714 112 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 VAV1P15498 845 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 CETN2P41208 172 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 P2RY2P41231 377 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 GARSP41250 739 aaKnown RBP19.78■□□□□ 0.76
DDX55-207ENST00000540763 RECQLP46063 649 aaPredicted RBP19.78■□□□□ 0.76
DDX55-207ENST00000540763 PXNP49023 591 aaPredicted RBP19.78■□□□□ 0.76
DDX55-207ENST00000540763 ZNF33AQ06730 810 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 USP39Q53GS9 565 aaKnown RBP19.78■□□□□ 0.76
DDX55-207ENST00000540763 RFX6Q8HWS3 928 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 PGBD3Q8N328 593 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 OR2A12Q8NGT7 310 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 HDAC11Q96DB2 347 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 SPACA7Q96KW9 195 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 ZNF830Q96NB3 372 aaPredicted RBP19.78■□□□□ 0.76
DDX55-207ENST00000540763 FAM129BQ96TA1 746 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 TPSD1Q9BZJ3 242 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 SEMA4AQ9H3S1 761 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 MTG2Q9H4K7 406 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 FCF1Q9Y324 198 aaKnown RBP19.78■□□□□ 0.76
DDX55-207ENST00000540763 ANKRD36A6QL64 1941 aa19.78■□□□□ 0.76
DDX55-207ENST00000540763 J3KR12 359 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 ADH1BP00325 375 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 TGM2P21980 687 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 NR2C2P49116 596 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 RPS14P62263 151 aaKnown RBP19.77■□□□□ 0.76
DDX55-207ENST00000540763 SNRPD1P62314 119 aaKnown RBP19.77■□□□□ 0.76
DDX55-207ENST00000540763 SFSWAPQ12872 951 aaKnown RBP19.77■□□□□ 0.76
DDX55-207ENST00000540763 TTC31Q49AM3 519 aaPredicted RBP19.77■□□□□ 0.76
DDX55-207ENST00000540763 TIGD7Q6NT04 549 aaPredicted RBP19.77■□□□□ 0.76
DDX55-207ENST00000540763 KIAA1324Q6UXG2 1013 aaKnown RBP19.77■□□□□ 0.76
DDX55-207ENST00000540763 BZW1Q7L1Q6 419 aaKnown RBP19.77■□□□□ 0.76
DDX55-207ENST00000540763 CCDC50Q8IVM0 306 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 TP53INP2Q8IXH6 220 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 STK40Q8N2I9 435 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 OR2AP1Q8NGE2 309 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 ALG3Q92685 438 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 LRIG1Q96JA1 1093 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 TSGA13Q96PP4 275 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 ITM2CQ9NQX7 267 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 DTLQ9NZJ0 730 aa19.77■□□□□ 0.76
DDX55-207ENST00000540763 VPS13AQ96RL7 3174 aa19.76■□□□□ 0.75
DDX55-207ENST00000540763 GOLGA6L9A6NEM1 432 aa19.76■□□□□ 0.75
DDX55-207ENST00000540763 C1QTNF3-AMACRE9PGA6 284 aa19.76■□□□□ 0.75
DDX55-207ENST00000540763 DDX3YO15523 660 aaKnown RBP19.76■□□□□ 0.75
DDX55-207ENST00000540763 RPP40O75818 363 aaKnown RBP19.76■□□□□ 0.75
DDX55-207ENST00000540763 DNTTP04053 509 aa19.76■□□□□ 0.75
DDX55-207ENST00000540763 ACADMP11310 421 aa19.76■□□□□ 0.75
DDX55-207ENST00000540763 HSPA9P38646 679 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 294.2 ms