RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 KLHL10Q6JEL2 608 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 FOXR1Q6PIV2 292 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 FMR1NBQ8N0W7 255 aaPredicted RBP14.58□□□□□ -0.08
VARS-228ENST00000495010 SLC22A18ASQ8N1D0 253 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 OR2A12Q8NGT7 310 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 TPCN2Q8NHX9 752 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 FEM1CQ96JP0 617 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 PPP1R13BQ96KQ4 1090 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 HDAC8Q9BY41 377 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 SLC17A9Q9BYT1 436 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 CLMPQ9H6B4 373 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 ASCL3Q9NQ33 180 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 WDR70Q9NW82 654 aa14.58□□□□□ -0.08
VARS-228ENST00000495010 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.58□□□□□ -0.08
VARS-228ENST00000495010 ZFR2Q9UPR6 939 aaKnown RBP14.58□□□□□ -0.08
VARS-228ENST00000495010 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.58□□□□□ -0.08
VARS-228ENST00000495010 ASH1LQ9NR48 2969 aaKnown RBP14.58□□□□□ -0.08
VARS-228ENST00000495010 ZNF462Q96JM2 2506 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 BICDL2A1A5D9 508 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 K7ERQ8 282 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 SNAP91O60641 907 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 PAGE1O75459 146 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 GNA14O95837 355 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 AFPP02771 609 aaKnown RBP14.57□□□□□ -0.08
VARS-228ENST00000495010 TGM2P21980 687 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 RABIFP47224 123 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 CLCN6P51797 869 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 NEK3P51956 506 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 KCNC4Q03721 635 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 SGCGQ13326 291 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 KIAA1161Q6NSJ0 714 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 LRRC31Q6UY01 552 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 CCDC81Q6ZN84 652 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 RBM44Q6ZP01 1051 aaKnown RBP14.57□□□□□ -0.08
VARS-228ENST00000495010 C11orf57Q6ZUT1 292 aaPredicted RBP14.57□□□□□ -0.08
VARS-228ENST00000495010 ENOSF1Q7L5Y1 443 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 EFL1Q7Z2Z2 1120 aaKnown RBP14.57□□□□□ -0.08
VARS-228ENST00000495010 C14orf80Q86SX3 495 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 PARGQ86W56 976 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 ARL14Q8N4G2 192 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 CHST14Q8NCH0 376 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 ZNF548Q8NEK5 533 aaPredicted RBP14.57□□□□□ -0.08
VARS-228ENST00000495010 GLMNQ92990 594 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 MED8Q96G25 268 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 ATXN7L3BQ96GX2 97 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 SLC46A1Q96NT5 459 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 IL12RB2Q99665 862 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.57□□□□□ -0.08
VARS-228ENST00000495010 SEMA4CQ9C0C4 833 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 TNKS2Q9H2K2 1166 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 WDCPQ9H6R7 721 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 SYNCQ9H7C4 482 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 VPS51Q9UID3 782 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 CSNK1G3Q9Y6M4 447 aa14.57□□□□□ -0.08
VARS-228ENST00000495010 LY6G6EA0A0G2JKS1 128 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 SPTY2D1-AS1A0A0U1RR47 76 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 M0QYT0 321 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 FPGTO14772 594 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 AQP9O43315 295 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 SLC28A2O43868 658 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 LEFTY1O75610 366 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 CNTN5O94779 1100 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 ENDOD1O94919 500 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 ADCY5O95622 1261 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 PAK4O96013 591 aaPredicted RBP14.56□□□□□ -0.08
VARS-228ENST00000495010 CSF2P04141 144 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 RPIAP49247 311 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 DNA2P51530 1060 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 PDE1CQ14123 709 aaPredicted RBP14.56□□□□□ -0.08
VARS-228ENST00000495010 FZD2Q14332 565 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 NR0B2Q15466 257 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 TMEM259Q4ZIN3 620 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 C22orf39Q6P5X5 142 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 IGF2-ASQ6U949 168 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 LINGO4Q6UY18 593 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 KYAT3Q6YP21 454 aaKnown RBP14.56□□□□□ -0.08
VARS-228ENST00000495010 SETD3Q86TU7 594 aaPredicted RBP14.56□□□□□ -0.08
VARS-228ENST00000495010 DCAF4L2Q8NA75 395 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 LMX1AQ8TE12 382 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 NELFBQ8WX92 580 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 TTC9Q92623 222 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 BMFQ96LC9 184 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 FAM81BQ96LP2 452 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 CPXM1Q96SM3 734 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 PSMB7Q99436 277 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 CAAP1Q9H8G2 361 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 ACP6Q9NPH0 428 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 U3KQA8 63 aa14.56□□□□□ -0.08
VARS-228ENST00000495010 KALRNO60229 2985 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 POM121BA6NF01 834 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 SMAD6O43541 496 aaKnown RBP14.55□□□□□ -0.08
VARS-228ENST00000495010 DAB1O75553 588 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 NME1P15531 152 aaKnown RBP14.55□□□□□ -0.08
VARS-228ENST00000495010 JUNDP17535 347 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 NOS2P35228 1153 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 ARHGAP44Q17R89 818 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 DEFB133Q30KQ1 61 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 ZSCAN23Q3MJ62 389 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 C5orf22Q49AR2 442 aa14.55□□□□□ -0.08
VARS-228ENST00000495010 ALFQ53S48 1182 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms