RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 MORC3Q14149 939 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 FZD2Q14332 565 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 DRAP1Q14919 205 aaPredicted RBP7.84□□□□□ -1.15
PDPN-205ENST00000487038 STILQ15468 1287 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 TGIF1Q15583 401 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 DLG2Q15700 870 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 NFIL3Q16649 462 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 BORAQ6PGQ7 559 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 ERN2Q76MJ5 926 aaKnown RBP7.84□□□□□ -1.15
PDPN-205ENST00000487038 SH2D3CQ8N5H7 860 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 LINC00301Q8NCQ3 95 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 TMIEQ8NEW7 156 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 DQX1Q8TE96 717 aaKnown RBP7.84□□□□□ -1.15
PDPN-205ENST00000487038 CCDC47Q96A33 483 aaKnown RBP7.84□□□□□ -1.15
PDPN-205ENST00000487038 FAM149B1Q96BN6 582 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 MYEOVQ96EZ4 313 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 SLC39A13Q96H72 371 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 TBATAQ96M53 351 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 SLC17A9Q9BYT1 436 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 UPF2Q9HAU5 1272 aaKnown RBP7.84□□□□□ -1.15
PDPN-205ENST00000487038 TUBD1Q9UJT1 453 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 DOLKQ9UPQ8 538 aa7.84□□□□□ -1.15
PDPN-205ENST00000487038 ANKRD36A6QL64 1941 aa7.84□□□□□ -1.16
PDPN-205ENST00000487038 POLQO75417 2590 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 CLEC18AA5D8T8 446 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 O00370 1275 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 PIK3R2O00459 728 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 NTN3O00634 580 aaPredicted RBP7.83□□□□□ -1.16
PDPN-205ENST00000487038 NOBOXO60393 691 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 CD2BP2O95400 341 aaKnown RBP7.83□□□□□ -1.16
PDPN-205ENST00000487038 YEATS4O95619 227 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 SYT1P21579 422 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 TBXAS1P24557 533 aaPredicted RBP7.83□□□□□ -1.16
PDPN-205ENST00000487038 CCKBRP32239 447 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 CHRNA3P32297 505 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 CASRP41180 1078 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 RECQLP46063 649 aaPredicted RBP7.83□□□□□ -1.16
PDPN-205ENST00000487038 RGS7P49802 495 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 NEK3P51956 506 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 KCNAB2Q13303 367 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 MTA1Q13330 715 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 CUL2Q13617 745 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 NCAPHQ15003 741 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 TMEM259Q4ZIN3 620 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 PRRT3Q5FWE3 981 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 TMEM164Q5U3C3 297 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 SEL1L3Q68CR1 1132 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 SHC4Q6S5L8 630 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 CLEC18BQ6UXF7 455 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 TAC4Q86UU9 113 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 ATCAYQ86WG3 371 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 PTRH1Q86Y79 214 aaKnown RBP7.83□□□□□ -1.16
PDPN-205ENST00000487038 SLC35F3Q8IY50 421 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 ARL10Q8N8L6 244 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 ATP11CQ8NB49 1132 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 CLEC18CQ8NCF0 446 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 DENND6BQ8NEG7 585 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 OR6C4Q8NGE1 309 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 SCG3Q8WXD2 468 aaKnown RBP7.83□□□□□ -1.16
PDPN-205ENST00000487038 BMFQ96LC9 184 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 HSFY1Q96LI6 401 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 ZNF396Q96N95 335 aaPredicted RBP7.83□□□□□ -1.16
PDPN-205ENST00000487038 C2orf49Q9BVC5 232 aaPredicted RBP7.83□□□□□ -1.16
PDPN-205ENST00000487038 HDAC8Q9BY41 377 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 SLC13A1Q9BZW2 595 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 MIS12Q9H081 205 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 MUC3BQ9H195 1237 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.83□□□□□ -1.16
PDPN-205ENST00000487038 PISDQ9UG56 409 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 IL36AQ9UHA7 158 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 PADI4Q9UM07 663 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 ZFR2Q9UPR6 939 aaKnown RBP7.83□□□□□ -1.16
PDPN-205ENST00000487038 HS3ST2Q9Y278 367 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 LOXL2Q9Y4K0 774 aa7.83□□□□□ -1.16
PDPN-205ENST00000487038 DOCK4Q8N1I0 1966 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 PRAMEF33A0A0G2JMD5 474 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 A0A1W2PQ27 194 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 A0A1W2PQ64 194 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 A0A1W2PQC6 194 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 BLACEA4D250 179 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 POM121BA6NF01 834 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 KCNU1A8MYU2 1149 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 LMO7DNF2Z398 122 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 PRAMEF10O60809 474 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 PAK4O96013 591 aaPredicted RBP7.82□□□□□ -1.16
PDPN-205ENST00000487038 RPLP0P05388 317 aaKnown RBP7.82□□□□□ -1.16
PDPN-205ENST00000487038 MYL1P05976 194 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 CTSLP07711 333 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 PAEPP09466 180 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 ALPIP09923 528 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 SLC2A3P11169 496 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 SRCP12931 536 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 HGFP14210 728 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 CCR10P46092 362 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 ATP1A2P50993 1020 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 BLKP51451 505 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 CLCN6P51797 869 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 ADKP55263 362 aaKnown RBP7.82□□□□□ -1.16
PDPN-205ENST00000487038 POLE2P56282 527 aa7.82□□□□□ -1.16
PDPN-205ENST00000487038 SRSF6Q13247 344 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms