RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TBL1XO60907 577 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 CLDN11O75508 207 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 SNAI1O95863 264 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 INHAP05111 366 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 SCNN1AP37088 669 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 CAMK2GQ13555 558 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 NKAPQ8N5F7 415 aaKnown RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 RSPH1Q8WYR4 309 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 CNDP1Q96KN2 507 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 PCYT2Q99447 389 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 SH3GL2Q99962 352 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 BTBD10Q9BSF8 475 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 STX18Q9P2W9 335 aaKnown RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 DOLKQ9UPQ8 538 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 KANSL1LA0AUZ9 987 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 KPNA3O00505 521 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 LRIG2O94898 1065 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 CCDC166P0CW27 439 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 RPL14P50914 215 aaKnown RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 FAM45BPQ6NSW5 357 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 PACS1Q6VY07 963 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 FAM228AQ86W67 206 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 CCDC185Q8N715 623 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 DBF4BQ8NFT6 615 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 FAM45AQ8TCE6 357 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 JADE3Q92613 823 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 OTUB1Q96FW1 271 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 ZBED3Q96IU2 234 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 PPP1R10Q96QC0 940 aaKnown RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 HMGXB4Q9UGU5 601 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 SORCS3Q9UPU3 1222 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 SCAMP3O14828 347 aaKnown RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 BUD23O43709 281 aaKnown RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 RHOQP17081 205 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 CYP2A7P20853 494 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 CTNNB1P35222 781 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 HALP42357 657 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 TTPAP49638 278 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 BST1Q10588 318 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 NFYCQ13952 458 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 PREPLQ4J6C6 727 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 NPAS4Q8IUM7 802 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 DEFB107AQ8IZN7 70 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 MCOLN3Q8TDD5 553 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 SLC44A1Q8WWI5 657 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 ACOX2Q99424 681 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 BCO2Q9BYV7 579 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 TM6SF2Q9BZW4 377 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 SDCBP2Q9H190 292 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 POMKQ9H5K3 350 aa13.97□□□□□ -0.17
BRAT1-203ENST00000467558 FBXO6Q9NRD1 293 aaPredicted RBP13.97□□□□□ -0.17
BRAT1-203ENST00000467558 EIF4E1BA6NMX2 242 aaKnown RBP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 CCNT2O60583 730 aaKnown RBP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 FKBP6O75344 327 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 ATP5F1P24539 256 aaPredicted RBP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 PSMA4P25789 261 aaKnown RBP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 EEF1DP29692 281 aaKnown RBP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 NDUFV1P49821 464 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 CYTH1Q15438 398 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 FOXR1Q6PIV2 292 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 TMEM110Q86TL2 294 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 FUBP3Q96I24 572 aaKnown RBP eCLIP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 SLC4A5Q9BY07 1137 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 ACE2Q9BYF1 805 aaPredicted RBP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 MYLK2Q9H1R3 596 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 ATP13A3Q9H7F0 1226 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 RMND5AQ9H871 391 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 NR5A2O00482 541 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 GCATO75600 419 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 GUCA1CO95843 209 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 NME5P56597 212 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 STARD3Q14849 445 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 TIGD5Q53EQ6 642 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 GALNT4Q8N4A0 578 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 PCDH19Q8TAB3 1148 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 METTL6Q8TCB7 284 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 CATSPER2Q96P56 530 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 TWNKQ96RR1 684 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 CNTN3Q9P232 1028 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 AGO1Q9UL18 857 aaKnown RBP13.96□□□□□ -0.17
BRAT1-203ENST00000467558 DYRK1BQ9Y463 629 aa13.96□□□□□ -0.17
BRAT1-203ENST00000467558 BIRC5O15392 142 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 DCXO43602 365 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 DRD4P21917 467 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 RAB10P61026 200 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 LRRC74AQ0VAA2 488 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 BOP1Q14137 746 aaKnown RBP13.96□□□□□ -0.18
BRAT1-203ENST00000467558 PARP15Q460N3 678 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 ATP6AP1LQ52LC2 224 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 PIWIL4Q7Z3Z4 852 aaKnown RBP13.96□□□□□ -0.18
BRAT1-203ENST00000467558 CMASQ8NFW8 434 aaPredicted RBP13.96□□□□□ -0.18
BRAT1-203ENST00000467558 SH3GL1Q99961 368 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 RNF39Q9H2S5 420 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 TMEM161AQ9NX61 479 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 ARMCX1Q9P291 453 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 MYH6P13533 1939 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 ITGB4P16144 1822 aa13.96□□□□□ -0.18
BRAT1-203ENST00000467558 A0A1W2PPM1 405 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms