RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NPWQ8N729 165 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 PPP1R13LQ8WUF5 828 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 AFG1LQ8WV93 481 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 GAB3Q8WWW8 586 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 EME1Q96AY2 570 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 SGF29Q96ES7 293 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 MCMBPQ9BTE3 642 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 NFKBIZQ9BYH8 718 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 PLK2Q9NYY3 685 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 BFARQ9NZS9 450 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 GMPR2Q9P2T1 348 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 VPS28Q9UK41 221 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 RUVBL2Q9Y230 463 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 GINS2Q9Y248 185 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 EEF2KO00418 725 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 STRNO43815 780 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 DLX3O60479 287 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 BEST1O76090 585 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 ZNF286BP0CG31 522 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 TXNP10599 105 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 GABRB3P28472 473 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 EPHX2P34913 555 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 BCAT1P54687 386 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 SH3BGRP55822 239 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 TMEM62Q0P6H9 643 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 PTK2BQ14289 1009 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 TSTD2Q5T7W7 516 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 CTU1Q7Z7A3 348 aaKnown RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 CENPLQ8N0S6 344 aaPredicted RBP11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 MYO1HQ8N1T3 1032 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 CCNYL1Q8N7R7 359 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 ANKRD52Q8NB46 1076 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 HMGCLL1Q8TB92 370 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 CASS4Q9NQ75 786 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 PIGVQ9NUD9 493 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 XPR1Q9UBH6 696 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 TLL2Q9Y6L7 1015 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 RALGAPA2Q2PPJ7 1873 aa11.92□□□□□ -0.5
PDZRN3-203ENST00000462146 M0QYT0 321 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 CLDN5O00501 218 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 DCLK1O15075 740 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 PFDN1O60925 122 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC35E2BP0CK96 405 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 PSMC3P17980 439 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 DPYSQ14117 519 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC25A52Q3SY17 297 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 ARHGAP17Q68EM7 881 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 ZNF280DQ6N043 979 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 CYP2R1Q6VVX0 501 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 MFSD6LQ8IWD5 586 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 CATSPER1Q8NEC5 780 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 SREK1Q8WXA9 508 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC29A1Q99808 456 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 EIF2AQ9BY44 585 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 SNX10Q9Y5X0 201 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 NEMP2A6NFY4 417 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 C9IYK1 514 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 E7ENX8 843 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 SPTLC1O15269 473 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 TRMUO75648 421 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 ERCC2P18074 760 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 NFKB1P19838 968 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 MPP1Q00013 466 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 USP10Q14694 798 aaKnown RBP11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 DGKDQ16760 1214 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 MTX3Q5HYI7 312 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 CEP97Q8IW35 865 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 DENND6AQ8IWF6 608 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 SULF1Q8IWU6 871 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 ABTB1Q969K4 478 aaPredicted RBP11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 IL22Q9GZX6 179 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 EFCAB1Q9HAE3 211 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 TNFRSF12AQ9NP84 129 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 SETD4Q9NVD3 440 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 EPS15L1Q9UBC2 864 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 PCDHGA7Q9Y5G6 932 aa11.91□□□□□ -0.5
PDZRN3-203ENST00000462146 CAPNS1P04632 268 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 HNRNPLP14866 589 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 CSRP3P50461 194 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 NR1H2P55055 460 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 CDH15P55291 814 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 PRKAA1Q13131 559 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 PAFAH1B3Q15102 231 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 ANO4Q32M45 955 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 SH2D4BQ5SQS7 431 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 KCTD11Q693B1 232 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 LRRC8EQ6NSJ5 796 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 GADL1Q6ZQY3 521 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 PIGZQ86VD9 579 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 ZC3HC1Q86WB0 502 aaKnown RBP11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 TMEM126BQ8IUX1 230 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 KDM1BQ8NB78 822 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 SLCO4A1Q96BD0 722 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 NXNL1Q96CM4 212 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 CAAP1Q9H8G2 361 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 GOLGA2P5Q9HBQ8 144 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 TXNRD2Q9NNW7 524 aa11.9□□□□□ -0.5
PDZRN3-203ENST00000462146 TLK1Q9UKI8 766 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms