RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ZNF41P51814 821 aaPredicted RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 RAC3P60763 192 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 HERVK_113P62684 666 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 AMPD2Q01433 879 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CHAF1BQ13112 559 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 POU4F3Q15319 338 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CLEC16AQ2KHT3 1053 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 PRSS53Q2L4Q9 553 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 ARHGEF16Q5VV41 709 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 PAPD7Q5XG87 772 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 SNRNP48Q6IEG0 339 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 ABHD15Q6UXT9 468 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 TADA2BQ86TJ2 420 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 SYCP3Q8IZU3 236 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 FAM133AQ8N9E0 248 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 LRRN4CLQ8ND94 238 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 WHAMMQ8TF30 809 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 TSPEARQ8WU66 669 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 FBXL18Q96ME1 805 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 ALS2CR12Q96Q35 445 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 FAM83CQ9BQN1 747 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 TTYH1Q9H313 450 aaPredicted RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 NTN4Q9HB63 628 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 FKBP14Q9NWM8 211 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 LARSQ9P2J5 1176 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 STK38LQ9Y2H1 464 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 PCDHA10Q9Y5I2 948 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 NPHP3-ACAD11A0A0J9YXS1 232 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 FIGNL2A6NMB9 653 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 EFCAB8A8MWE9 144 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 PSMD9O00233 223 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 DNAJB6O75190 326 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 ULK1O75385 1050 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 DGAT1O75907 488 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 NDST3O95803 873 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 CCNE2O96020 404 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 TUBBP07437 444 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 NR2F2P24468 414 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 GTF2H1P32780 548 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 HMGCS2P54868 508 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 RALGDSQ12967 914 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 KCNAB2Q13303 367 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 BAATQ14032 418 aaPredicted RBP7.96□□□□□ -1.13
BRCC3-208ENST00000453705 CTTNQ14247 550 aaKnown RBP7.96□□□□□ -1.13
BRCC3-208ENST00000453705 WHAMMP3Q1A5X7 153 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 PCGF3Q3KNV8 242 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 CYP27C1Q4G0S4 372 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 TMEM53Q6P2H8 277 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 C6orf89Q6UWU4 347 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 PRPF39Q86UA1 669 aaKnown RBP7.96□□□□□ -1.13
BRCC3-208ENST00000453705 LRRC34Q8IZ02 419 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 CELF5Q8N6W0 485 aaKnown RBP7.96□□□□□ -1.13
BRCC3-208ENST00000453705 MCPH1Q8NEM0 835 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 SLC35C1Q96A29 364 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 ACCSQ96QU6 501 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 CITED2Q99967 270 aaPredicted RBP7.96□□□□□ -1.13
BRCC3-208ENST00000453705 XKR8Q9H6D3 395 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 ARMCX3Q9UH62 379 aaPredicted RBP7.96□□□□□ -1.13
BRCC3-208ENST00000453705 FZD1Q9UP38 647 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 NPFFR2Q9Y5X5 522 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 STYXL1Q9Y6J8 313 aa7.96□□□□□ -1.13
BRCC3-208ENST00000453705 CES2O00748 559 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 CILPO75339 1184 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 INHAP05111 366 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 TMIGD3P0DMS9 266 aaPredicted RBP7.96□□□□□ -1.14
BRCC3-208ENST00000453705 ADCY8P40145 1251 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 PMS2P54278 862 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 CASP9P55211 416 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 BASP1P80723 227 aaKnown RBP7.96□□□□□ -1.14
BRCC3-208ENST00000453705 DCTN2Q13561 401 aaKnown RBP7.96□□□□□ -1.14
BRCC3-208ENST00000453705 PROX2Q3B8N5 592 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 Q3ZCU0 254 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 ZRANB3Q5FWF4 1079 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 ARSIQ5FYB1 569 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 PTCHD4Q6ZW05 846 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 USP45Q70EL2 814 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 ZNF227Q86WZ6 799 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 ABRAQ8N0Z2 381 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 ZNF483Q8TF39 744 aaPredicted RBP7.96□□□□□ -1.14
BRCC3-208ENST00000453705 ZDHHC1Q8WTX9 485 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 CYFIP2Q96F07 1278 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 RPGRIP1Q96KN7 1286 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 FGD4Q96M96 766 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 SLC9A7Q96T83 725 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 TDRD1Q9BXT4 1180 aaKnown RBP7.96□□□□□ -1.14
BRCC3-208ENST00000453705 NHEJ1Q9H9Q4 299 aaPredicted RBP7.96□□□□□ -1.14
BRCC3-208ENST00000453705 SIX2Q9NPC8 291 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 EMC3Q9P0I2 261 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 BAIAP2L1Q9UHR4 511 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 RIPK3Q9Y572 518 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 SERTM2A0A1B0GWG4 89 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 OR6C65A6NJZ3 312 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 CBX4O00257 560 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 VILLO15195 856 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 ST8SIA5O15466 376 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 GAS2O43903 313 aaKnown RBP7.96□□□□□ -1.14
BRCC3-208ENST00000453705 MTX2O75431 263 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 AKAP5P24588 427 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 AOAHP28039 575 aa7.96□□□□□ -1.14
BRCC3-208ENST00000453705 YWHABP31946 246 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms