RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 FNDC3AQ9Y2H6 1198 aaKnown RBP17.96■□□□□ 0.47
NUP50-208ENST00000430547 SNX11Q9Y5W9 270 aa17.96■□□□□ 0.47
NUP50-208ENST00000430547 CREB3O43889 395 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 PSMA2P25787 234 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 CD38P28907 300 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 EPHB2P29323 1055 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 L1CAMP32004 1257 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 PRKCIP41743 596 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 UBASH3AP57075 661 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 PPP2CBP62714 309 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 PPP2CAP67775 309 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 ARF5P84085 180 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 SHC2P98077 582 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 FANCCQ00597 558 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 POLD3Q15054 466 aaPredicted RBP17.95■□□□□ 0.46
NUP50-208ENST00000430547 PPP1R15BQ5SWA1 713 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 ARTNQ5T4W7 220 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 AGBL4Q5VU57 503 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 NLRP14Q86W24 1093 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 TMIEQ8NEW7 156 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 ARHGEF2Q92974 986 aaKnown RBP17.95■□□□□ 0.46
NUP50-208ENST00000430547 FAM131CQ96AQ9 280 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 ORAI3Q9BRQ5 295 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 NDFIP2Q9NV92 336 aa17.95■□□□□ 0.46
NUP50-208ENST00000430547 TPRP12270 2363 aaKnown RBP17.94■□□□□ 0.46
NUP50-208ENST00000430547 VILLO15195 856 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 FLRT2O43155 660 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 ATMINO43313 823 aaPredicted RBP17.94■□□□□ 0.46
NUP50-208ENST00000430547 DFNA5O60443 496 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 ZMPSTE24O75844 475 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 CTSLP07711 333 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 GZMAP12544 262 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 MAT2AP31153 395 aaKnown RBP17.94■□□□□ 0.46
NUP50-208ENST00000430547 NUDT1P36639 197 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 ACVRL1P37023 503 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 CCT8P50990 548 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 MAMLD1Q13495 774 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 TRIP6Q15654 476 aaKnown RBP17.94■□□□□ 0.46
NUP50-208ENST00000430547 TDRD12Q587J7 1177 aaKnown RBP17.94■□□□□ 0.46
NUP50-208ENST00000430547 FIGNQ5HY92 759 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 DPY19L3Q6ZPD9 716 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 ZNF571Q7Z3V5 609 aaPredicted RBP17.94■□□□□ 0.46
NUP50-208ENST00000430547 PYROXD2Q8N2H3 581 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 CHST14Q8NCH0 376 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 TRIM11Q96F44 468 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 CAMK1GQ96NX5 476 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 MAGEB5Q9BZ81 275 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 TTYH3Q9C0H2 523 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 CATSPERBQ9H7T0 1116 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 PREBQ9HCU5 417 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 FZD10Q9ULW2 581 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 NEU3Q9UQ49 428 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 FCF1Q9Y324 198 aaKnown RBP17.94■□□□□ 0.46
NUP50-208ENST00000430547 PCDHGB2Q9Y5G2 931 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 CABIN1Q9Y6J0 2220 aa17.94■□□□□ 0.46
NUP50-208ENST00000430547 ACACBO00763 2458 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 CXorf51AA0A1B0GTR3 108 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 LATO43561 262 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 RNF8O76064 485 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 FTLP02792 175 aaPredicted RBP17.93■□□□□ 0.46
NUP50-208ENST00000430547 CTSKP43235 329 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 SKOR2Q2VWA4 1001 aaPredicted RBP17.93■□□□□ 0.46
NUP50-208ENST00000430547 SETMARQ53H47 684 aaPredicted RBP17.93■□□□□ 0.46
NUP50-208ENST00000430547 CARD16Q5EG05 197 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 ARSIQ5FYB1 569 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 E4F1Q66K89 784 aaPredicted RBP17.93■□□□□ 0.46
NUP50-208ENST00000430547 NAPEPLDQ6IQ20 393 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 PLEKHA7Q6IQ23 1121 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 VPS36Q86VN1 386 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 TRIM69Q86WT6 500 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 RYBPQ8N488 228 aaPredicted RBP17.93■□□□□ 0.46
NUP50-208ENST00000430547 RTL3Q8N8U3 475 aaKnown RBP17.93■□□□□ 0.46
NUP50-208ENST00000430547 ZNF653Q96CK0 615 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 IQCDQ96DY2 449 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 HEPHQ9BQS7 1158 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 TM6SF2Q9BZW4 377 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 EBF2Q9HAK2 575 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 CNOT8Q9UFF9 292 aaKnown RBP17.93■□□□□ 0.46
NUP50-208ENST00000430547 DMTF1Q9Y222 760 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 SCINQ9Y6U3 715 aa17.93■□□□□ 0.46
NUP50-208ENST00000430547 ZSCAN5CA6NGD5 496 aaPredicted RBP17.92■□□□□ 0.46
NUP50-208ENST00000430547 FGF10O15520 208 aaPredicted RBP17.92■□□□□ 0.46
NUP50-208ENST00000430547 LEFTY1O75610 366 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 TRIM16O95361 564 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 SKILP12757 684 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 CCNHP51946 323 aaPredicted RBP17.92■□□□□ 0.46
NUP50-208ENST00000430547 TPI1P60174 286 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 INAVAQ3KP66 663 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 ZSCAN23Q3MJ62 389 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 PIP5KL1Q5T9C9 394 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 ERN2Q76MJ5 926 aaKnown RBP17.92■□□□□ 0.46
NUP50-208ENST00000430547 ISG20Q96AZ6 181 aaKnown RBP17.92■□□□□ 0.46
NUP50-208ENST00000430547 ARRDC3Q96B67 414 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.92■□□□□ 0.46
NUP50-208ENST00000430547 ZDHHC6Q9H6R6 413 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 GDF3Q9NR23 364 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 DONSONQ9NYP3 566 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 PCOLCE2Q9UKZ9 415 aa17.92■□□□□ 0.46
NUP50-208ENST00000430547 BZW2Q9Y6E2 419 aaKnown RBP17.92■□□□□ 0.46
NUP50-208ENST00000430547 TRPM6Q9BX84 2022 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1289.1 ms