RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CSNK1EP49674 416 aaKnown RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 ADPRHP54922 357 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 TPI1P60174 286 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 GRIK2Q13002 908 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 TRIM14Q14142 442 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 POM121L1PQ3SYA9 428 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 ARTNQ5T4W7 220 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 ERMARDQ5T6L9 678 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 HGSNATQ68CP4 663 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 SPECC1LQ69YQ0 1117 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 PRPF39Q86UA1 669 aaKnown RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 RYBPQ8N488 228 aaPredicted RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 PCDH20Q8N6Y1 951 aaKnown RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 RTL3Q8N8U3 475 aaKnown RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 RNF214Q8ND24 703 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 TMIEQ8NEW7 156 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 OR2A12Q8NGT7 310 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 SKA1Q96BD8 255 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 PPP1R16AQ96I34 528 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 EIF3CQ99613 913 aaKnown RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 ACE2Q9BYF1 805 aaPredicted RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 TNKS2Q9H2K2 1166 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 KDM4CQ9H3R0 1056 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 DHX35Q9H5Z1 703 aaKnown RBP11.44□□□□□ -0.58
RFFL-204ENST00000414419 OSGEPQ9NPF4 335 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 NDFIP2Q9NV92 336 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 IL36AQ9UHA7 158 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 PCSK1NQ9UHG2 260 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 AP4E1Q9UPM8 1137 aa11.44□□□□□ -0.58
RFFL-204ENST00000414419 TRPM6Q9BX84 2022 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 A0A1B0GVT2 93 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 A0A1W2PPC4 97 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 EEF2KO00418 725 aaKnown RBP11.43□□□□□ -0.58
RFFL-204ENST00000414419 PLK4O00444 970 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 BUB1O43683 1085 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 KDELR3O43731 214 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 ZMPSTE24O75844 475 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 CSRP1P21291 193 aaKnown RBP11.43□□□□□ -0.58
RFFL-204ENST00000414419 MIPP30301 263 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 DRD3P35462 400 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 GRIA4P48058 902 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 CCR5P51681 352 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 C21orf59P57076 290 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 YBEYP58557 167 aaPredicted RBP11.43□□□□□ -0.58
RFFL-204ENST00000414419 ARF5P84085 180 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 CNTN1Q12860 1018 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 ACAP1Q15027 740 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 SLC45A4Q5BKX6 768 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 CARD16Q5EG05 197 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 CCDC122Q5T0U0 273 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 PSAPL1Q6NUJ1 521 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 ALKBH5Q6P6C2 394 aaKnown RBP11.43□□□□□ -0.58
RFFL-204ENST00000414419 DPY19L3Q6ZPD9 716 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 OR2I1PQ8NGU4 316 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 C1orf216Q8TAB5 229 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 GRIN3AQ8TCU5 1115 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 HEPHQ9BQS7 1158 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 DEF6Q9H4E7 631 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 GAREM1Q9H706 876 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 TM9SF3Q9HD45 589 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 AASDHPPTQ9NRN7 309 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 ZNHIT6Q9NWK9 470 aaKnown RBP11.43□□□□□ -0.58
RFFL-204ENST00000414419 GPATCH2LQ9NWQ4 482 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 SARDHQ9UL12 918 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 FCF1Q9Y324 198 aaKnown RBP11.43□□□□□ -0.58
RFFL-204ENST00000414419 DNAH14Q0VDD8 3507 aa11.43□□□□□ -0.58
RFFL-204ENST00000414419 A0A087X0T9 212 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 WASH4PA8MWX3 477 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 PLRG1O43660 514 aaKnown RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 LEFTY1O75610 366 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 IGHV4-34P06331 123 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 CTSLP07711 333 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 ADRB1P08588 477 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 FAM228BP0C875 321 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 CEACAM1P13688 526 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 CCNHP51946 323 aaPredicted RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 METAP1P53582 386 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 SNRPD1P62314 119 aaKnown RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 RACK1P63244 317 aaKnown RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 SLC14A1Q13336 389 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 PIGHQ14442 188 aaPredicted RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 HLA-BQ31612 363 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 PARP15Q460N3 678 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 PPP6R3Q5H9R7 873 aaPredicted RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 PSTKQ8IV42 348 aaKnown RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 CHST14Q8NCH0 376 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 DEFB124Q8NES8 71 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 OR8K1Q8NGG5 319 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 CASKIN2Q8WXE0 1202 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 ISG20Q96AZ6 181 aaKnown RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 SNRNP25Q9BV90 132 aaKnown RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 TM6SF2Q9BZW4 377 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 THAP2Q9H0W7 228 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 ZDHHC6Q9H6R6 413 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 DNAAF2Q9NVR5 837 aaKnown RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 HECAQ9UBI9 543 aaPredicted RBP11.42□□□□□ -0.58
RFFL-204ENST00000414419 IP6K2Q9UHH9 426 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 NEU3Q9UQ49 428 aa11.42□□□□□ -0.58
RFFL-204ENST00000414419 ANKRD6Q9Y2G4 727 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms