RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 POLR2DO15514 142 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 AKR1B10O60218 316 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CEP104O60308 925 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 B4GALT3O60512 393 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SRGAP2O75044 1071 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ERAL1O75616 437 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 DGKIO75912 1065 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SEC31AO94979 1220 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 PGM3O95394 542 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 PLATP00750 562 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 PROCP04070 461 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 AMY2AP04746 511 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CYP17A1P05093 508 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ITGA5P08648 1049 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 VIMP08670 466 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 FURINP09958 794 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CCDC159P0C7I6 412 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 STAG3L1P0CL83 205 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CCDC166P0CW27 439 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 PLS3P13797 630 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ZFXP17010 805 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 HDCP19113 662 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 AMY2BP19961 511 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 MCM3P25205 808 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 NMT1P30419 496 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CTNNB1P35222 781 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 NNMTP40261 264 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 MLH1P40692 756 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 RANBP1P43487 201 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 LIMK1P53667 647 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 PRKAA2P54646 552 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ASIC1P78348 528 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CDK17Q00537 523 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CDC42EP1Q00587 391 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 DSC2Q02487 901 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ACTN3Q08043 901 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CUL4BQ13620 913 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 GIT2Q14161 759 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ADGRE1Q14246 886 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SEMA3AQ14563 771 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SNCBQ16143 134 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 MAPK6Q16659 721 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SGSM1Q2NKQ1 1148 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ZC2HC1CQ53FD0 456 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 THEMIS2Q5TEJ8 643 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 NT5DC1Q5TFE4 455 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ATL3Q6DD88 541 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 RAB12Q6IQ22 244 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 NOTUMQ6P988 496 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 BORAQ6PGQ7 559 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SHQ1Q6PI26 577 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 KLHDC10Q6PID8 442 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 KLHL17Q6TDP4 642 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 PACS1Q6VY07 963 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 BZW1Q7L1Q6 419 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 UBE3DQ7Z6J8 389 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ALYREFQ86V81 257 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 UNC45BQ8IWX7 931 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 TMEM130Q8N3G9 435 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 FSIP1Q8NA03 581 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SPC24Q8NBT2 197 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SMG8Q8ND04 991 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 TMEM161BQ8NDZ6 487 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 MOSPD2Q8NHP6 518 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 GSDMBQ8TAX9 411 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SPATA18Q8TC71 538 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CCHCR1Q8TD31 782 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 THAP4Q8WY91 577 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 HDAC10Q969S8 669 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ZNF689Q96CS4 500 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 DNAJC19Q96DA6 116 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ZBTB45Q96K62 511 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CASD1Q96PB1 797 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 TGS1Q96RS0 853 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 FNBP1Q96RU3 617 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 FIZ1Q96SL8 496 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CDX2Q99626 313 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 C7orf25Q9BPX7 421 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 NFKBIZQ9BYH8 718 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 TRIM4Q9C037 500 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CXCL16Q9H2A7 254 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 BLZF1Q9H2G9 400 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 FZD8Q9H461 694 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SEPSECSQ9HD40 501 aaKnown RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 PRMT7Q9NVM4 692 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.71□□□□□ -1.66
SF3B1-202ENST00000409915 TMEM161AQ9NX61 479 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 MTMR10Q9NXD2 777 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 PRR13Q9NZ81 148 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 VPS18Q9P253 973 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ANKFY1Q9P2R3 1169 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 CACNG4Q9UBN1 327 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 KCNH3Q9ULD8 1083 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 INSL6Q9Y581 213 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 PCDHB2Q9Y5E7 798 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 ATP6V1DQ9Y5K8 247 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 SLC30A1Q9Y6M5 507 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 TTC3P53804 2025 aa4.71□□□□□ -1.66
SF3B1-202ENST00000409915 KIAA1671Q9BY89 1806 aa4.7□□□□□ -1.66
SF3B1-202ENST00000409915 TMEM265A0A087WTH1 108 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 1179.1 ms