RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 SPDYCQ5MJ68 293 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 PLET1Q6UQ28 207 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 FBXO39Q8N4B4 442 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 CELF4Q9BZC1 486 aaKnown RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 LMAN2LQ9H0V9 348 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 PTGFRNQ9P2B2 879 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 HBS1LQ9Y450 684 aaKnown RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ATXN2Q99700 1313 aaKnown RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 PLOD2O00469 737 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ADSLP30566 484 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 LHX1P48742 406 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 SREBF2Q12772 1141 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 EPC2Q52LR7 807 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ZNF549Q6P9A3 640 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 GDPD5Q8WTR4 605 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 CDH19Q9H159 772 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 MUC13Q9H3R2 512 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ETS1P14921 441 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 IGFALSP35858 605 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 CCR4P51679 360 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 MYBPC1Q00872 1141 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ADSSL1Q8N142 457 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 KLF6Q99612 283 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 BTBD10Q9BSF8 475 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 DHRS7Q9Y394 339 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 COMMD3-BMI1R4GMX3 469 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 FAM86C2PA6NEL3 165 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 NCF1BA6NI72 391 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 NCF1CA8MVU1 366 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 CETPP11597 493 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 NCF1P14598 390 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 PBLDP30039 288 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 EPHB3P54753 998 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 RASGEF1BQ0VAM2 473 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 LSM12Q3MHD2 195 aaKnown RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ZFP69Q49AA0 526 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 RNF180Q86T96 592 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ARMC8Q8IUR7 673 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 LZTR1Q8N653 840 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 TP53INP1Q96A56 240 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 CPA3P15088 417 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 TCF7P36402 384 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 RABL6Q3YEC7 729 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ATXN7L2Q5T6C5 722 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 DNAJB7Q7Z6W7 309 aaPredicted RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 STK32CQ86UX6 486 aa14.92□□□□□ -0.02
CCDC50-201ENST00000392455 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 PPIEQ9UNP9 301 aaKnown RBP14.92□□□□□ -0.02
CCDC50-201ENST00000392455 ZBTB14O43829 449 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 MPZL2O60487 215 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 APOL3O95236 402 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 NR1H2P55055 460 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 AQP5P55064 265 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 NR1I3Q14994 352 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 TRIM40Q6P9F5 258 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 DENND5BQ6ZUT9 1274 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 NUDT12Q9BQG2 462 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 CHKBQ9Y259 395 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 LYVE1Q9Y5Y7 322 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 RHOBTB2Q9BYZ6 727 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 IRX2Q9BZI1 471 aaPredicted RBP14.91□□□□□ -0.02
CCDC50-201ENST00000392455 TRHDEQ9UKU6 1024 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 R3HDM2Q9Y2K5 976 aaKnown RBP14.91□□□□□ -0.02
CCDC50-201ENST00000392455 RLN2P04090 185 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 S100A3P33764 101 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 NFE2Q16621 373 aaPredicted RBP14.91□□□□□ -0.02
CCDC50-201ENST00000392455 CHST12Q9NRB3 414 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 H3BQF6 201 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 NUMBP49757 651 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 ARCQ7LC44 396 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 PDPRQ8NCN5 879 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 CDADC1Q9BWV3 514 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 IKZF3Q9UKT9 509 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 RNF17Q9BXT8 1623 aaKnown RBP14.91□□□□□ -0.02
CCDC50-201ENST00000392455 BCORL1Q5H9F3 1711 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 POLR2EP19388 210 aaKnown RBP14.91□□□□□ -0.02
CCDC50-201ENST00000392455 ACAT1P24752 427 aaKnown RBP14.91□□□□□ -0.02
CCDC50-201ENST00000392455 SLC1A6P48664 564 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 PITPNAQ00169 270 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 BNIP2Q12982 314 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 ZHX1-C8orf76Q96EF9 292 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 SHCBP1LQ9BZQ2 653 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 SPON1Q9HCB6 807 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 M0QYT0 321 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 MLYCDO95822 493 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 SLC2A4P14672 509 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 USF2Q15853 346 aaPredicted RBP14.91□□□□□ -0.02
CCDC50-201ENST00000392455 CHST15Q7LFX5 561 aaPredicted RBP14.91□□□□□ -0.02
CCDC50-201ENST00000392455 HCN3Q9P1Z3 774 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 CELF2O95319 508 aaKnown RBP14.91□□□□□ -0.02
CCDC50-201ENST00000392455 MAPK8P45983 427 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 GLRA4Q5JXX5 417 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 GJB7Q6PEY0 223 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 RNF145Q96MT1 663 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 TMEM168Q9H0V1 697 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 RMI1Q9H9A7 625 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 TBX20Q9UMR3 447 aa14.91□□□□□ -0.02
CCDC50-201ENST00000392455 TULP4Q9NRJ4 1543 aa14.9□□□□□ -0.02
CCDC50-201ENST00000392455 PTGES3LE9PB15 166 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms