RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CLCN5P51795 746 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PLEKHM3Q6ZWE6 761 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 LUZP2Q86TE4 346 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 FITM2Q8N6M3 262 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 KAT2BQ92831 832 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 DGCR14Q96DF8 476 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 OSMRQ99650 979 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 OSBPL11Q9BXB4 747 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 EMILIN2Q9BXX0 1053 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 USP20Q9Y2K6 914 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 TNPO3Q9Y5L0 923 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 C5orf60A6NFR6 353 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 FGF10O15520 208 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 PEX1O43933 1283 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 RHOCP08134 193 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 MLNP12872 115 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 CCDC130P13994 396 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ZNF7P17097 686 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 PSMB4P28070 264 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 MZF1P28698 734 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 TUBP50607 506 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 EFEMP1Q12805 493 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 NEDD8Q15843 81 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 GRIK4Q16099 956 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 LY6KQ17RY6 165 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PIGWQ7Z7B1 504 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 CYP4Z1Q86W10 505 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 TTC30AQ86WT1 665 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ITFG1Q8TB96 612 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 C7orf26Q96N11 449 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PWWP2AQ96N64 755 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ELOVL4Q9GZR5 314 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PIDD1Q9HB75 910 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 SPAG4Q9NPE6 437 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 LIMD1Q9UGP4 676 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 DAPK2Q9UIK4 370 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 CAB39Q9Y376 341 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 MTF2Q9Y483 593 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 AK5Q9Y6K8 562 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PDZK1P1A8MUH7 402 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 SNAP91O60641 907 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 OCM2P0CE71 109 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 OCMP0CE72 109 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 CDC25CP30307 473 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ENPEPQ07075 957 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ELAVL2Q12926 359 aaKnown RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 BNIP2Q12982 314 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 DDR2Q16832 855 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 OVOS1Q6IE37 1185 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PLEKHH3Q7Z736 793 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 TTC7BQ86TV6 843 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ADHFE1Q8IWW8 467 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 SFRP1Q8N474 314 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PCDH20Q8N6Y1 951 aaKnown RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 OR52K1Q8NGK4 314 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ZSCAN18Q8TBC5 510 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 STAG3L4Q8TBR4 150 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 EDEM1Q92611 657 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 MRPL57Q9BQC6 102 aaKnown RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 FBXO6Q9NRD1 293 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 ZNF112Q9UJU3 913 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ZMYND8Q9ULU4 1186 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 PSMD13Q9UNM6 376 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ADAMTS3O15072 1205 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 USP12O75317 370 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 MAFO75444 373 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 CSDE1O75534 798 aaKnown RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 TM7SF2O76062 418 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 SERPIND1P05546 499 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ALOX15P16050 662 aaPredicted RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 SERPINH1P50454 418 aaKnown RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 ST13P50502 369 aaKnown RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 RAB27AP51159 221 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 TBX4P57082 545 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 UBE3AQ05086 875 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PCBP1Q15365 356 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS36-201ENST00000378060 LIPMQ5VYY2 423 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 NPNTQ6UXI9 565 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 WDR60Q8WVS4 1066 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ACOX2Q99424 681 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 TRMOQ9BU70 441 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PRDM12Q9H4Q4 367 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PNPLA3Q9NST1 481 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PIH1D1Q9NWS0 290 aaKnown RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 UTP6Q9NYH9 597 aaKnown RBP8.5□□□□□ -1.05
VPS36-201ENST00000378060 TRPM5Q9NZQ8 1165 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 KLHL3Q9UH77 587 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 TMCO1Q9UM00 188 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PLLPQ9Y342 182 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 PTPRFP10586 1907 aa8.5□□□□□ -1.05
VPS36-201ENST00000378060 ATG7O95352 703 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 UQCRBP14927 111 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 C4BPBP20851 252 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 RHOAP61586 193 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 BLMHQ13867 455 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 NOMO1Q15155 1222 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 CCDC142Q17RM4 750 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 ASTE1Q2TB18 679 aaPredicted RBP8.49□□□□□ -1.05
VPS36-201ENST00000378060 ADGRD1Q6QNK2 874 aa8.49□□□□□ -1.05
VPS36-201ENST00000378060 TSHZ1Q6ZSZ6 1077 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms