RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 FAM84AQ96KN4 292 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 INVSQ9Y283 1065 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 MAGEC1O60732 1142 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 PSMD10O75832 226 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 SEC24AO95486 1093 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 ITGAVP06756 1048 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 NELFEP18615 380 aaKnown RBP16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 PIK3R1P27986 724 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 TBX4P57082 545 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 PDCD4Q53EL6 469 aaKnown RBP16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 RNF19BQ6ZMZ0 732 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 PSTKQ8IV42 348 aaKnown RBP16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 RBM12BQ8IXT5 1001 aaKnown RBP16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 C8orf59Q8N0T1 100 aaPredicted RBP16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 UCMAQ8WVF2 138 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 MTG1Q9BT17 334 aaPredicted RBP16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 TELO2Q9Y4R8 837 aa16.68■□□□□ 0.26
SH3RF1-201ENST00000284637 SPATA31A5Q5VU36 1347 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 SPATA31A7Q8IWB4 1347 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 LOC100506127A0A0U1RQW1 187 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 USP17L7P0C7H9 530 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF284Q2VY69 593 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 LPCAT4Q643R3 524 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 SCARA3Q6AZY7 606 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 OVOS1Q6IE37 1185 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 PGBD3Q8N328 593 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 REPS2Q8NFH8 660 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 WDR48Q8TAF3 677 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 DNAJB14Q8TBM8 379 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 MED8Q96G25 268 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 SPRTNQ9H040 489 aaPredicted RBP16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 COQ6Q9Y2Z9 468 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 RBMX2Q9Y388 322 aaKnown RBP16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 PCDHA11Q9Y5I1 949 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 RGSL1A5PLK6 1076 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 PEX11AO75192 247 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 TNFRSF21O75509 655 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 SERPINA6P08185 405 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 TSPAN8P19075 237 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 LSM3P62310 102 aaKnown RBP16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 CNTN2Q02246 1040 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF621Q6ZSS3 439 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 SCAIQ8N9R8 606 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 BPIFB6Q8NFQ5 453 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 DNERQ8NFT8 737 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 BTBD9Q96Q07 612 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 PSMD13Q9UNM6 376 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 MAP2P11137 1827 aaKnown RBP16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 hCG_1818297A0A087WSY0 165 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 MEIS2O14770 477 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 TM7SF2O76062 418 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 LBPP18428 481 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 FEN1P39748 380 aaKnown RBP16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 GTF2BQ00403 316 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 KLHL12Q53G59 568 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 ADCY4Q8NFM4 1077 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 RCN3Q96D15 328 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 RNF157Q96PX1 679 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 CAMKK2Q96RR4 588 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 SNRNP25Q9BV90 132 aaKnown RBP16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 TRPM5Q9NZQ8 1165 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 TCRBV9S1A1TA0A576 114 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 BUD23O43709 281 aaKnown RBP16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 EVX2Q03828 476 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 TMEM109Q9BVC6 243 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 IKZF4Q9H2S9 585 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 ABCB10Q9NRK6 738 aa16.67■□□□□ 0.26
SH3RF1-201ENST00000284637 PRR5-ARHGAP8B1AHC4 643 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 SNRPB2P08579 225 aaKnown RBP16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 MSX2P35548 267 aaPredicted RBP16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ARHGAP8P85298 464 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 BOP1Q14137 746 aaKnown RBP16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 SPIDRQ14159 915 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 SLC9A5Q14940 896 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 CASP12Q6UXS9 341 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ENKURQ8TC29 256 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ULBP1Q9BZM6 244 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 RPRD1BQ9NQG5 326 aaKnown RBP16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 TRUB2O95900 331 aaKnown RBP16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 TGFB3P10600 412 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF143P52747 638 aaPredicted RBP16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 GRIK4Q16099 956 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ECM1Q16610 540 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 SLC27A1Q6PCB7 646 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ARCQ7LC44 396 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 WDR36Q8NI36 951 aaKnown RBP16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 IL22Q9GZX6 179 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 SPATC1LQ9H0A9 340 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 POPDC2Q9HBU9 364 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ALOX15BO15296 676 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 FGD3Q5JSP0 725 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF57Q68EA5 555 aaPredicted RBP16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 BBS12Q6ZW61 710 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 GLT6D1Q7Z4J2 308 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ACTRT2Q8TDY3 377 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 DNAJB3Q8WWF6 145 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 TMEM169Q96HH4 297 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 GLT1D1Q96MS3 346 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 VAT1Q99536 393 aa16.66■□□□□ 0.26
SH3RF1-201ENST00000284637 ATP13A1Q9HD20 1204 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms