RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CNTD1Q8N815 330 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 DTX3LQ8TDB6 740 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 CLPTM1LQ96KA5 538 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 DRC3Q9H069 523 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 IARS2Q9NSE4 1012 aaKnown RBP25.47■■□□□ 1.67
ROM1-201ENST00000278833 NDE1Q9NXR1 346 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.47■■□□□ 1.67
ROM1-201ENST00000278833 FNIP2Q9P278 1114 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 RAP2CQ9Y3L5 183 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 IRAK2O43187 625 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 ATP9BO43861 1147 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 SNUPNO95149 360 aaKnown RBP25.46■■□□□ 1.67
ROM1-201ENST00000278833 JCHAINP01591 159 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 ADSLP30566 484 aaPredicted RBP25.46■■□□□ 1.67
ROM1-201ENST00000278833 PSEN1P49768 467 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 RAB27AP51159 221 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 NRG1Q02297 640 aaPredicted RBP25.46■■□□□ 1.67
ROM1-201ENST00000278833 LIPMQ5VYY2 423 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 PKN3Q6P5Z2 889 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 NAPRTQ6XQN6 538 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 ARHGAP12Q8IWW6 846 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 TMEM151AQ8N4L1 468 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 MTG1Q9BT17 334 aaPredicted RBP25.46■■□□□ 1.67
ROM1-201ENST00000278833 CHRAC1Q9NRG0 131 aa25.46■■□□□ 1.67
ROM1-201ENST00000278833 M0QZQ0 153 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 INHAP05111 366 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 NMBRP28336 390 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 CRABP2P29373 138 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 IRF9Q00978 393 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 METTL23Q86XA0 190 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 ZNF781Q8N8C0 355 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 AZIN2Q96A70 460 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 RTKNQ9BST9 563 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 GATA5Q9BWX5 397 aaPredicted RBP25.45■■□□□ 1.67
ROM1-201ENST00000278833 COG4Q9H9E3 785 aa25.45■■□□□ 1.67
ROM1-201ENST00000278833 MEI4A8MW99 385 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 SLCO1B7G3V0H7 640 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 AKR1A1P14550 325 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 MAPRE1Q15691 268 aaKnown RBP25.45■■□□□ 1.66
ROM1-201ENST00000278833 ARTNQ5T4W7 220 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 MFSD14CQ5VZR4 134 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 POTEHQ6S545 545 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 LRRC49Q8IUZ0 686 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 STYXQ8WUJ0 223 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 EDEM1Q92611 657 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 NR1H4Q96RI1 486 aaPredicted RBP25.45■■□□□ 1.66
ROM1-201ENST00000278833 TBL1YQ9BQ87 522 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 ACE2Q9BYF1 805 aaPredicted RBP25.45■■□□□ 1.66
ROM1-201ENST00000278833 S100A14Q9HCY8 104 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 CACNG4Q9UBN1 327 aa25.45■■□□□ 1.66
ROM1-201ENST00000278833 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.44■■□□□ 1.66
ROM1-201ENST00000278833 MATN2O00339 956 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 DUSP11O75319 330 aaKnown RBP25.44■■□□□ 1.66
ROM1-201ENST00000278833 SCNN1GP51170 649 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 RABGGTBP53611 331 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 SLC25A3Q00325 362 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 CACNB2Q08289 660 aaPredicted RBP25.44■■□□□ 1.66
ROM1-201ENST00000278833 GRM3Q14832 879 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 AFMIDQ63HM1 303 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 TNS4Q8IZW8 715 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 TDRD5Q8NAT2 981 aaKnown RBP25.44■■□□□ 1.66
ROM1-201ENST00000278833 PGLYRP2Q96PD5 576 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 ILKAPQ9H0C8 392 aaPredicted RBP25.44■■□□□ 1.66
ROM1-201ENST00000278833 SMOC2Q9H3U7 446 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 TIMM13Q9Y5L4 95 aaPredicted RBP25.44■■□□□ 1.66
ROM1-201ENST00000278833 SNX10Q9Y5X0 201 aa25.44■■□□□ 1.66
ROM1-201ENST00000278833 TDRD15B5MCY1 1934 aaKnown RBP25.44■■□□□ 1.66
ROM1-201ENST00000278833 TARM1B6A8C7 271 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 ITGAXP20702 1163 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 GEMP55040 296 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 NKX3-2P78367 333 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 KLF10Q13118 480 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 DLG2Q15700 870 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 CFAP157Q5JU67 520 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 KBTBD2Q8IY47 623 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 TSNARE1Q96NA8 513 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 VCXQ9H320 206 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 CATSPERBQ9H7T0 1116 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 CAB39LQ9H9S4 337 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 GLOD4Q9HC38 313 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 ZDHHC7Q9NXF8 308 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 VTI1BQ9UEU0 232 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 CDH22Q9UJ99 828 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 TLK1Q9UKI8 766 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 ARHGEF37A1IGU5 675 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 GPR182O15218 404 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 MYCP01106 439 aaPredicted RBP25.43■■□□□ 1.66
ROM1-201ENST00000278833 COX4I1P13073 169 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 PRKAR2AP13861 404 aaKnown RBP25.43■■□□□ 1.66
ROM1-201ENST00000278833 CDC25CP30307 473 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 ADRA1AP35348 466 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 XIAPP98170 497 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 SLC12A1Q13621 1099 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 MAP3K21Q5TCX8 1036 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 SETD3Q86TU7 594 aaPredicted RBP25.43■■□□□ 1.66
ROM1-201ENST00000278833 SERINC5Q86VE9 423 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 ATPAF2Q8N5M1 289 aa25.43■■□□□ 1.66
ROM1-201ENST00000278833 CPSF7Q8N684 471 aaKnown RBP25.43■■□□□ 1.66
ROM1-201ENST00000278833 PDCD6IPQ8WUM4 868 aaKnown RBP25.43■■□□□ 1.66
ROM1-201ENST00000278833 FATE1Q969F0 183 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms